Protein–RNA interactions for Protein: P40215

NDE1, External NADH-ubiquinone oxidoreductase 1, mitochondrial, yeastyeast

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NDE1P40215 YLR154C-GYLR154C-G 150 nt11.87□□□□□ -0.51
NDE1P40215 tM(CAU)CtM(CAU)C 72 nt11.86□□□□□ -0.51
NDE1P40215 IMT4tM(CAU)E 72 nt11.86□□□□□ -0.51
NDE1P40215 IMT3tM(CAU)J3 72 nt11.86□□□□□ -0.51
NDE1P40215 IMT1tM(CAU)O1 72 nt11.86□□□□□ -0.51
NDE1P40215 IMT2tM(CAU)P 72 nt11.86□□□□□ -0.51
NDE1P40215 DCW1YKL046C 1350 nt11.85□□□□□ -0.51
NDE1P40215 PTP1YDL230W 1008 nt11.84□□□□□ -0.51
NDE1P40215 PUS2YGL063W 1113 nt11.82□□□□□ -0.52
NDE1P40215 YJL152WYJL152W 360 nt11.79□□□□□ -0.52
NDE1P40215 FPS1YLL043W 2010 nt11.79□□□□□ -0.52
NDE1P40215 TAT1YBR069C 1860 nt11.78□□□□□ -0.52
NDE1P40215 ART5YGR068C 1761 nt11.76□□□□□ -0.53
NDE1P40215 PAC11YDR488C 1602 nt11.75□□□□□ -0.53
NDE1P40215 CAC2YML102W 1407 nt11.74□□□□□ -0.53
NDE1P40215 TIR4YOR009W 1464 nt11.74□□□□□ -0.53
NDE1P40215 EMI2YDR516C 1503 nt11.73□□□□□ -0.53
NDE1P40215 YCH1YGR203W 447 nt11.73□□□□□ -0.53
NDE1P40215 PET9YBL030C 957 nt11.72□□□□□ -0.53
NDE1P40215 YMR090WYMR090W 684 nt11.7□□□□□ -0.54
NDE1P40215 GFD2YCL036W 1701 nt11.69□□□□□ -0.54
NDE1P40215 IMP2'YIL154C 1041 nt11.68□□□□□ -0.54
NDE1P40215 YDL221WYDL221W 552 nt11.66□□□□□ -0.54
NDE1P40215 DSK2YMR276W 1122 nt11.66□□□□□ -0.54
NDE1P40215 YMR057CYMR057C 372 nt11.63□□□□□ -0.55
NDE1P40215 IDH1YNL037C 1083 nt11.6□□□□□ -0.55
NDE1P40215 YCL048W-AYCL048W-A 240 nt11.57□□□□□ -0.56
NDE1P40215 YLR236CYLR236C 324 nt11.56□□□□□ -0.56
NDE1P40215 RTS2YOR077W 699 nt11.56□□□□□ -0.56
NDE1P40215 IRC15YPL017C 1500 nt11.55□□□□□ -0.56
NDE1P40215 YPR011CYPR011C 981 nt11.54□□□□□ -0.56
NDE1P40215 FMP45YDL222C 930 nt11.52□□□□□ -0.57
NDE1P40215 GIS3YLR094C 1509 nt11.5□□□□□ -0.57
NDE1P40215 SDH1YKL148C 1923 nt11.5□□□□□ -0.57
NDE1P40215 GBP2YCL011C 1284 nt11.48□□□□□ -0.57
NDE1P40215 YBR220CYBR220C 1683 nt11.48□□□□□ -0.57
NDE1P40215 CUE1YMR264W 612 nt11.47□□□□□ -0.57
NDE1P40215 SCC4YER147C 1875 nt11.44□□□□□ -0.58
NDE1P40215 YDR433WYDR433W 441 nt11.44□□□□□ -0.58
NDE1P40215 NVJ2YPR091C 2313 nt11.41□□□□□ -0.58
NDE1P40215 ERV46YAL042W 1248 nt11.39□□□□□ -0.59
NDE1P40215 LPX1YOR084W 1164 nt11.39□□□□□ -0.59
NDE1P40215 TCD2YKL027W 1344 nt11.36□□□□□ -0.59
NDE1P40215 YIL100WYIL100W 354 nt11.36□□□□□ -0.59
NDE1P40215 YKR040CYKR040C 504 nt11.32□□□□□ -0.6
NDE1P40215 MXR2YCL033C 507 nt11.31□□□□□ -0.6
NDE1P40215 RRD1YIL153W 1182 nt11.28□□□□□ -0.6
NDE1P40215 DED1YOR204W 1815 nt11.25□□□□□ -0.61
NDE1P40215 YNL195CYNL195C 786 nt11.22□□□□□ -0.61
NDE1P40215 FMP52YER004W 696 nt11.17□□□□□ -0.62
NDE1P40215 RPM1RPM1 483 nt11.16□□□□□ -0.62
NDE1P40215 YCL042WYCL042W 360 nt11.15□□□□□ -0.62
NDE1P40215 PCH2YBR186W 1695 nt11.14□□□□□ -0.63
NDE1P40215 FMT1YBL013W 1206 nt11.14□□□□□ -0.63
NDE1P40215 SPP1YPL138C 1062 nt11.14□□□□□ -0.63
NDE1P40215 YSC84YHR016C 1407 nt11.14□□□□□ -0.63
NDE1P40215 GUT2YIL155C 1950 nt11.12□□□□□ -0.63
NDE1P40215 RRT12YCR045C 1476 nt11.12□□□□□ -0.63
NDE1P40215 FRD1YEL047C 1413 nt11.11□□□□□ -0.63
NDE1P40215 SOR2YDL246C 1074 nt11.1□□□□□ -0.63
NDE1P40215 SEC11YIR022W 504 nt11.1□□□□□ -0.63
NDE1P40215 SOR1YJR159W 1074 nt11.1□□□□□ -0.63
NDE1P40215 YHL050CYHL050C 2094 nt11.07□□□□□ -0.64
NDE1P40215 CWP1YKL096W 720 nt11.07□□□□□ -0.64
NDE1P40215 ADH2YMR303C 1047 nt11.03□□□□□ -0.64
NDE1P40215 PCM1YEL058W 1674 nt11.02□□□□□ -0.64
NDE1P40215 SNF6YHL025W 999 nt10.99□□□□□ -0.65
NDE1P40215 FRE6YLL051C 2139 nt10.97□□□□□ -0.65
NDE1P40215 YJL225CYJL225C 5277 nt10.96□□□□□ -0.65
NDE1P40215 MRPL8YJL063C 717 nt10.96□□□□□ -0.65
NDE1P40215 PTH1YHR189W 573 nt10.94□□□□□ -0.66
NDE1P40215 YLR235CYLR235C 399 nt10.93□□□□□ -0.66
NDE1P40215 RTG1YOL067C 534 nt10.93□□□□□ -0.66
NDE1P40215 PIB2YGL023C 1908 nt10.92□□□□□ -0.66
NDE1P40215 YEL076C-AYEL076C-A 651 nt10.9□□□□□ -0.66
NDE1P40215 YEL076CYEL076C 651 nt10.9□□□□□ -0.66
NDE1P40215 YLR464WYLR464W 651 nt10.9□□□□□ -0.66
NDE1P40215 ADO1YJR105W 1023 nt10.88□□□□□ -0.67
NDE1P40215 SIM1YIL123W 1431 nt10.87□□□□□ -0.67
NDE1P40215 YKL030WYKL030W 606 nt10.85□□□□□ -0.67
NDE1P40215 DIC1YLR348C 897 nt10.85□□□□□ -0.67
NDE1P40215 RNQ1YCL028W 1218 nt10.85□□□□□ -0.67
NDE1P40215 YIH1YCR059C 777 nt10.84□□□□□ -0.67
NDE1P40215 BIO4YNR057C 714 nt10.82□□□□□ -0.68
NDE1P40215 LCB1YMR296C 1677 nt10.82□□□□□ -0.68
NDE1P40215 HUA1YGR268C 597 nt10.8□□□□□ -0.68
NDE1P40215 BOP3YNL042W 1191 nt10.79□□□□□ -0.68
NDE1P40215 TIM23YNR017W 669 nt10.79□□□□□ -0.68
NDE1P40215 RTF1YGL244W 1677 nt10.79□□□□□ -0.68
NDE1P40215 YLL053CYLL053C 459 nt10.76□□□□□ -0.69
NDE1P40215 NCP1YHR042W 2076 nt10.75□□□□□ -0.69
NDE1P40215 YLR179CYLR179C 606 nt10.74□□□□□ -0.69
NDE1P40215 FTR1YER145C 1215 nt10.7□□□□□ -0.7
NDE1P40215 ERF2YLR246W 1080 nt10.68□□□□□ -0.7
NDE1P40215 GAL1YBR020W 1587 nt10.66□□□□□ -0.7
NDE1P40215 YPR064WYPR064W 420 nt10.66□□□□□ -0.7
NDE1P40215 AQY1YPR192W 918 nt10.66□□□□□ -0.7
NDE1P40215 PTK1YKL198C 1989 nt10.64□□□□□ -0.71
NDE1P40215 TRM5YHR070W 1500 nt10.63□□□□□ -0.71
NDE1P40215 YFL067WYFL067W 528 nt10.62□□□□□ -0.71
Retrieved 100 of 7,029 protein–RNA pairs in 13.6 ms