Protein–RNA interactions for Protein: P40107

VRG4, GDP-mannose transporter 1, yeastyeast

Predictions only

Length 337 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VRG4P40107 SUF2tP(AGG)C 72 nt11.74□□□□□ -0.53
VRG4P40107 SUF10tP(AGG)N 72 nt11.74□□□□□ -0.53
VRG4P40107 PUS2YGL063W 1113 nt11.73□□□□□ -0.53
VRG4P40107 SIS1YNL007C 1059 nt11.73□□□□□ -0.53
VRG4P40107 PTP1YDL230W 1008 nt11.72□□□□□ -0.53
VRG4P40107 DCW1YKL046C 1350 nt11.71□□□□□ -0.53
VRG4P40107 YLR154C-GYLR154C-G 150 nt11.7□□□□□ -0.54
VRG4P40107 RPP2AYOL039W 321 nt11.67□□□□□ -0.54
VRG4P40107 TIR4YOR009W 1464 nt11.65□□□□□ -0.54
VRG4P40107 YPR011CYPR011C 981 nt11.65□□□□□ -0.54
VRG4P40107 CAC2YML102W 1407 nt11.63□□□□□ -0.55
VRG4P40107 YCH1YGR203W 447 nt11.62□□□□□ -0.55
VRG4P40107 ART5YGR068C 1761 nt11.6□□□□□ -0.55
VRG4P40107 YLR236CYLR236C 324 nt11.6□□□□□ -0.55
VRG4P40107 YJL152WYJL152W 360 nt11.59□□□□□ -0.55
VRG4P40107 GFD2YCL036W 1701 nt11.55□□□□□ -0.56
VRG4P40107 DSK2YMR276W 1122 nt11.51□□□□□ -0.57
VRG4P40107 YBR220CYBR220C 1683 nt11.51□□□□□ -0.57
VRG4P40107 EMI2YDR516C 1503 nt11.5□□□□□ -0.57
VRG4P40107 YMR057CYMR057C 372 nt11.48□□□□□ -0.57
VRG4P40107 PET9YBL030C 957 nt11.46□□□□□ -0.57
VRG4P40107 IRC15YPL017C 1500 nt11.45□□□□□ -0.58
VRG4P40107 FMP45YDL222C 930 nt11.44□□□□□ -0.58
VRG4P40107 RTS2YOR077W 699 nt11.44□□□□□ -0.58
VRG4P40107 PAC11YDR488C 1602 nt11.44□□□□□ -0.58
VRG4P40107 YDL221WYDL221W 552 nt11.42□□□□□ -0.58
VRG4P40107 IMP2'YIL154C 1041 nt11.39□□□□□ -0.59
VRG4P40107 MOT3YMR070W 1473 nt11.38□□□□□ -0.59
VRG4P40107 YMR090WYMR090W 684 nt11.38□□□□□ -0.59
VRG4P40107 LPX1YOR084W 1164 nt11.38□□□□□ -0.59
VRG4P40107 IDH1YNL037C 1083 nt11.36□□□□□ -0.59
VRG4P40107 FPS1YLL043W 2010 nt11.34□□□□□ -0.59
VRG4P40107 SDH1YKL148C 1923 nt11.33□□□□□ -0.6
VRG4P40107 GIS3YLR094C 1509 nt11.33□□□□□ -0.6
VRG4P40107 GBP2YCL011C 1284 nt11.31□□□□□ -0.6
VRG4P40107 ERV46YAL042W 1248 nt11.29□□□□□ -0.6
VRG4P40107 MXR2YCL033C 507 nt11.29□□□□□ -0.6
VRG4P40107 YCL048W-AYCL048W-A 240 nt11.29□□□□□ -0.6
VRG4P40107 YDR433WYDR433W 441 nt11.28□□□□□ -0.6
VRG4P40107 CUE1YMR264W 612 nt11.25□□□□□ -0.61
VRG4P40107 SPP1YPL138C 1062 nt11.25□□□□□ -0.61
VRG4P40107 DED1YOR204W 1815 nt11.21□□□□□ -0.61
VRG4P40107 PCH2YBR186W 1695 nt11.21□□□□□ -0.61
VRG4P40107 SCC4YER147C 1875 nt11.21□□□□□ -0.62
VRG4P40107 RRD1YIL153W 1182 nt11.2□□□□□ -0.62
VRG4P40107 GUT2YIL155C 1950 nt11.18□□□□□ -0.62
VRG4P40107 YKR040CYKR040C 504 nt11.17□□□□□ -0.62
VRG4P40107 TCD2YKL027W 1344 nt11.13□□□□□ -0.63
VRG4P40107 SEC11YIR022W 504 nt11.12□□□□□ -0.63
VRG4P40107 FMT1YBL013W 1206 nt11.12□□□□□ -0.63
VRG4P40107 NVJ2YPR091C 2313 nt11.07□□□□□ -0.64
VRG4P40107 FRD1YEL047C 1413 nt11.06□□□□□ -0.64
VRG4P40107 YIL100WYIL100W 354 nt11.05□□□□□ -0.64
VRG4P40107 PIB2YGL023C 1908 nt11.05□□□□□ -0.64
VRG4P40107 YSC84YHR016C 1407 nt11.01□□□□□ -0.65
VRG4P40107 RRT12YCR045C 1476 nt11□□□□□ -0.65
VRG4P40107 RTG1YOL067C 534 nt10.97□□□□□ -0.65
VRG4P40107 SOR2YDL246C 1074 nt10.95□□□□□ -0.66
VRG4P40107 SOR1YJR159W 1074 nt10.95□□□□□ -0.66
VRG4P40107 YHL050CYHL050C 2094 nt10.94□□□□□ -0.66
VRG4P40107 ADH2YMR303C 1047 nt10.94□□□□□ -0.66
VRG4P40107 CWP1YKL096W 720 nt10.93□□□□□ -0.66
VRG4P40107 FMP52YER004W 696 nt10.9□□□□□ -0.66
VRG4P40107 PTH1YHR189W 573 nt10.9□□□□□ -0.66
VRG4P40107 YCL042WYCL042W 360 nt10.9□□□□□ -0.66
VRG4P40107 RTF1YGL244W 1677 nt10.88□□□□□ -0.67
VRG4P40107 PCM1YEL058W 1674 nt10.86□□□□□ -0.67
VRG4P40107 YEL076C-AYEL076C-A 651 nt10.86□□□□□ -0.67
VRG4P40107 YEL076CYEL076C 651 nt10.86□□□□□ -0.67
VRG4P40107 YLR464WYLR464W 651 nt10.86□□□□□ -0.67
VRG4P40107 Q0182Q0182 405 nt10.85□□□□□ -0.67
VRG4P40107 MRPL8YJL063C 717 nt10.85□□□□□ -0.67
VRG4P40107 YNL195CYNL195C 786 nt10.84□□□□□ -0.67
VRG4P40107 SNF6YHL025W 999 nt10.77□□□□□ -0.69
VRG4P40107 PTK1YKL198C 1989 nt10.76□□□□□ -0.69
VRG4P40107 BOP3YNL042W 1191 nt10.75□□□□□ -0.69
VRG4P40107 LCB1YMR296C 1677 nt10.73□□□□□ -0.69
VRG4P40107 ADO1YJR105W 1023 nt10.72□□□□□ -0.69
VRG4P40107 YLR235CYLR235C 399 nt10.72□□□□□ -0.69
VRG4P40107 DIC1YLR348C 897 nt10.72□□□□□ -0.69
VRG4P40107 YKL030WYKL030W 606 nt10.7□□□□□ -0.7
VRG4P40107 YIH1YCR059C 777 nt10.68□□□□□ -0.7
VRG4P40107 BIO4YNR057C 714 nt10.68□□□□□ -0.7
VRG4P40107 RNQ1YCL028W 1218 nt10.66□□□□□ -0.7
VRG4P40107 SIM1YIL123W 1431 nt10.66□□□□□ -0.7
VRG4P40107 HUA1YGR268C 597 nt10.64□□□□□ -0.71
VRG4P40107 TIM23YNR017W 669 nt10.64□□□□□ -0.71
VRG4P40107 NCP1YHR042W 2076 nt10.63□□□□□ -0.71
VRG4P40107 YLL053CYLL053C 459 nt10.63□□□□□ -0.71
VRG4P40107 UBX6YJL048C 1191 nt10.59□□□□□ -0.71
VRG4P40107 YLR179CYLR179C 606 nt10.58□□□□□ -0.72
VRG4P40107 WSC2YNL283C 1512 nt10.55□□□□□ -0.72
VRG4P40107 FTR1YER145C 1215 nt10.53□□□□□ -0.72
VRG4P40107 GAL1YBR020W 1587 nt10.52□□□□□ -0.73
VRG4P40107 TRM5YHR070W 1500 nt10.5□□□□□ -0.73
VRG4P40107 ATF2YGR177C 1608 nt10.5□□□□□ -0.73
VRG4P40107 YFL054CYFL054C 1941 nt10.49□□□□□ -0.73
VRG4P40107 AHT1YHR093W 549 nt10.48□□□□□ -0.73
VRG4P40107 LYS4YDR234W 2082 nt10.48□□□□□ -0.73
VRG4P40107 SPT8YLR055C 1809 nt10.45□□□□□ -0.74
Retrieved 100 of 7,029 protein–RNA pairs in 7.5 ms