Protein–RNA interactions for Protein: P39967

UBP9, Ubiquitin carboxyl-terminal hydrolase 9, yeastyeast

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP9P39967 tM(CAU)CtM(CAU)C 72 nt14.54□□□□□ -0.08
UBP9P39967 IMT4tM(CAU)E 72 nt14.54□□□□□ -0.08
UBP9P39967 IMT3tM(CAU)J3 72 nt14.54□□□□□ -0.08
UBP9P39967 IMT1tM(CAU)O1 72 nt14.54□□□□□ -0.08
UBP9P39967 IMT2tM(CAU)P 72 nt14.54□□□□□ -0.08
UBP9P39967 YBL100CYBL100C 315 nt14.54□□□□□ -0.08
UBP9P39967 NME1NME1 340 nt14.51□□□□□ -0.09
UBP9P39967 PHO4YFR034C 939 nt14.46□□□□□ -0.09
UBP9P39967 AIR1YIL079C 1083 nt14.4□□□□□ -0.1
UBP9P39967 TRM9YML014W 840 nt14.4□□□□□ -0.1
UBP9P39967 FUN26YAL022C 1554 nt14.39□□□□□ -0.11
UBP9P39967 YLR281CYLR281C 468 nt14.39□□□□□ -0.11
UBP9P39967 PUS2YGL063W 1113 nt14.34□□□□□ -0.11
UBP9P39967 YCR099CYCR099C 468 nt14.32□□□□□ -0.12
UBP9P39967 WHI5YOR083W 888 nt14.31□□□□□ -0.12
UBP9P39967 YIR018C-AYIR018C-A 138 nt14.25□□□□□ -0.13
UBP9P39967 Q0010Q0010 387 nt14.25□□□□□ -0.13
UBP9P39967 CCT6YDR188W 1641 nt14.24□□□□□ -0.13
UBP9P39967 SRN2YLR119W 642 nt14.18□□□□□ -0.14
UBP9P39967 RPM1RPM1 483 nt14.13□□□□□ -0.15
UBP9P39967 PHO92YDR374C 921 nt14.12□□□□□ -0.15
UBP9P39967 FAR3YMR052W 615 nt14.11□□□□□ -0.15
UBP9P39967 ALF1YNL148C 765 nt14.11□□□□□ -0.15
UBP9P39967 YLR154C-GYLR154C-G 150 nt14.1□□□□□ -0.15
UBP9P39967 KTR3YBR205W 1215 nt14.09□□□□□ -0.15
UBP9P39967 YPS1YLR120C 1710 nt14.08□□□□□ -0.16
UBP9P39967 SUF2tP(AGG)C 72 nt14.08□□□□□ -0.16
UBP9P39967 SUF10tP(AGG)N 72 nt14.08□□□□□ -0.16
UBP9P39967 YPR011CYPR011C 981 nt14.05□□□□□ -0.16
UBP9P39967 MOT3YMR070W 1473 nt14.05□□□□□ -0.16
UBP9P39967 ARP10YDR106W 855 nt14.04□□□□□ -0.16
UBP9P39967 DSK2YMR276W 1122 nt14.04□□□□□ -0.16
UBP9P39967 PET20YPL159C 762 nt14.04□□□□□ -0.16
UBP9P39967 YDR095CYDR095C 411 nt14.03□□□□□ -0.16
UBP9P39967 YLR236CYLR236C 324 nt13.99□□□□□ -0.17
UBP9P39967 FMP45YDL222C 930 nt13.98□□□□□ -0.17
UBP9P39967 IMP2'YIL154C 1041 nt13.95□□□□□ -0.18
UBP9P39967 NEM1YHR004C 1341 nt13.94□□□□□ -0.18
UBP9P39967 YDR008CYDR008C 351 nt13.91□□□□□ -0.18
UBP9P39967 YHR165W-AYHR165W-A 312 nt13.91□□□□□ -0.18
UBP9P39967 YJL152WYJL152W 360 nt13.91□□□□□ -0.18
UBP9P39967 SIS1YNL007C 1059 nt13.91□□□□□ -0.18
UBP9P39967 YNR068CYNR068C 819 nt13.87□□□□□ -0.19
UBP9P39967 SPT5YML010W 3192 nt13.86□□□□□ -0.19
UBP9P39967 URE2YNL229C 1065 nt13.84□□□□□ -0.19
UBP9P39967 YCH1YGR203W 447 nt13.83□□□□□ -0.2
UBP9P39967 YHL044WYHL044W 708 nt13.81□□□□□ -0.2
UBP9P39967 TIR4YOR009W 1464 nt13.79□□□□□ -0.2
UBP9P39967 RPP2AYOL039W 321 nt13.78□□□□□ -0.2
UBP9P39967 IDH1YNL037C 1083 nt13.75□□□□□ -0.21
UBP9P39967 LPX1YOR084W 1164 nt13.74□□□□□ -0.21
UBP9P39967 MEP2YNL142W 1500 nt13.74□□□□□ -0.21
UBP9P39967 AST1YBL069W 1290 nt13.72□□□□□ -0.21
UBP9P39967 PTP1YDL230W 1008 nt13.71□□□□□ -0.21
UBP9P39967 snR78snR78 87 nt13.7□□□□□ -0.22
UBP9P39967 ERV46YAL042W 1248 nt13.7□□□□□ -0.22
UBP9P39967 YMR119W-AYMR119W-A 375 nt13.69□□□□□ -0.22
UBP9P39967 ART5YGR068C 1761 nt13.68□□□□□ -0.22
UBP9P39967 YDR433WYDR433W 441 nt13.65□□□□□ -0.22
UBP9P39967 YPL168WYPL168W 1293 nt13.63□□□□□ -0.23
UBP9P39967 PET9YBL030C 957 nt13.61□□□□□ -0.23
UBP9P39967 SPP1YPL138C 1062 nt13.61□□□□□ -0.23
UBP9P39967 GBP2YCL011C 1284 nt13.61□□□□□ -0.23
UBP9P39967 YMR057CYMR057C 372 nt13.6□□□□□ -0.23
UBP9P39967 CAC2YML102W 1407 nt13.59□□□□□ -0.23
UBP9P39967 GFD2YCL036W 1701 nt13.59□□□□□ -0.23
UBP9P39967 MRPL8YJL063C 717 nt13.57□□□□□ -0.24
UBP9P39967 YKR040CYKR040C 504 nt13.56□□□□□ -0.24
UBP9P39967 DCW1YKL046C 1350 nt13.56□□□□□ -0.24
UBP9P39967 STD1YOR047C 1335 nt13.54□□□□□ -0.24
UBP9P39967 MXR2YCL033C 507 nt13.53□□□□□ -0.24
UBP9P39967 PUS9YDL036C 1389 nt13.53□□□□□ -0.24
UBP9P39967 YCL048W-AYCL048W-A 240 nt13.52□□□□□ -0.25
UBP9P39967 IRC14YOR135C 342 nt13.49□□□□□ -0.25
UBP9P39967 HAS1YMR290C 1518 nt13.48□□□□□ -0.25
UBP9P39967 ARA2YMR041C 1008 nt13.45□□□□□ -0.26
UBP9P39967 RTG1YOL067C 534 nt13.42□□□□□ -0.26
UBP9P39967 YEL076C-AYEL076C-A 651 nt13.41□□□□□ -0.26
UBP9P39967 YEL076CYEL076C 651 nt13.41□□□□□ -0.26
UBP9P39967 YLR464WYLR464W 651 nt13.41□□□□□ -0.26
UBP9P39967 TCD2YKL027W 1344 nt13.4□□□□□ -0.26
UBP9P39967 GTT3YEL017W 1014 nt13.39□□□□□ -0.27
UBP9P39967 ADO1YJR105W 1023 nt13.39□□□□□ -0.27
UBP9P39967 SKG1YKR100C 1068 nt13.39□□□□□ -0.27
UBP9P39967 RTS2YOR077W 699 nt13.39□□□□□ -0.27
UBP9P39967 PEX27YOR193W 1131 nt13.39□□□□□ -0.27
UBP9P39967 FPS1YLL043W 2010 nt13.39□□□□□ -0.27
UBP9P39967 Q0182Q0182 405 nt13.38□□□□□ -0.27
UBP9P39967 EMI2YDR516C 1503 nt13.38□□□□□ -0.27
UBP9P39967 UTP6YDR449C 1323 nt13.36□□□□□ -0.27
UBP9P39967 DED1YOR204W 1815 nt13.34□□□□□ -0.27
UBP9P39967 IRC15YPL017C 1500 nt13.34□□□□□ -0.27
UBP9P39967 YOL150CYOL150C 312 nt13.33□□□□□ -0.28
UBP9P39967 RRD1YIL153W 1182 nt13.32□□□□□ -0.28
UBP9P39967 YDL221WYDL221W 552 nt13.31□□□□□ -0.28
UBP9P39967 NEJ1YLR265C 1029 nt13.28□□□□□ -0.28
UBP9P39967 ABZ2YMR289W 1125 nt13.28□□□□□ -0.28
UBP9P39967 CUS2YNL286W 858 nt13.28□□□□□ -0.28
UBP9P39967 FRD1YEL047C 1413 nt13.27□□□□□ -0.29
UBP9P39967 SSA4YER103W 1929 nt13.27□□□□□ -0.29
Retrieved 100 of 7,029 protein–RNA pairs in 13.8 ms