Protein–RNA interactions for Protein: P39944

UBP5, Ubiquitin carboxyl-terminal hydrolase 5, yeastyeast

Predictions only

Length 805 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP5P39944 IMT3tM(CAU)J3 72 nt13.45□□□□□ -0.26
UBP5P39944 IMT1tM(CAU)O1 72 nt13.45□□□□□ -0.26
UBP5P39944 IMT2tM(CAU)P 72 nt13.45□□□□□ -0.26
UBP5P39944 EMI2YDR516C 1503 nt13.38□□□□□ -0.27
UBP5P39944 ART5YGR068C 1761 nt13.37□□□□□ -0.27
UBP5P39944 TIR4YOR009W 1464 nt13.35□□□□□ -0.27
UBP5P39944 YLR281CYLR281C 468 nt13.33□□□□□ -0.28
UBP5P39944 YLR154C-GYLR154C-G 150 nt13.32□□□□□ -0.28
UBP5P39944 WHI5YOR083W 888 nt13.32□□□□□ -0.28
UBP5P39944 GFD2YCL036W 1701 nt13.3□□□□□ -0.28
UBP5P39944 PUS2YGL063W 1113 nt13.28□□□□□ -0.28
UBP5P39944 YJL152WYJL152W 360 nt13.27□□□□□ -0.29
UBP5P39944 YDL221WYDL221W 552 nt13.26□□□□□ -0.29
UBP5P39944 YCH1YGR203W 447 nt13.25□□□□□ -0.29
UBP5P39944 IRC15YPL017C 1500 nt13.24□□□□□ -0.29
UBP5P39944 RTS2YOR077W 699 nt13.23□□□□□ -0.29
UBP5P39944 YMR057CYMR057C 372 nt13.21□□□□□ -0.29
UBP5P39944 PET9YBL030C 957 nt13.19□□□□□ -0.3
UBP5P39944 YBR220CYBR220C 1683 nt13.16□□□□□ -0.3
UBP5P39944 YMR090WYMR090W 684 nt13.15□□□□□ -0.3
UBP5P39944 GIS3YLR094C 1509 nt13.13□□□□□ -0.31
UBP5P39944 YPR011CYPR011C 981 nt13.13□□□□□ -0.31
UBP5P39944 SDH1YKL148C 1923 nt13.11□□□□□ -0.31
UBP5P39944 YLR236CYLR236C 324 nt13.07□□□□□ -0.32
UBP5P39944 FPS1YLL043W 2010 nt13.03□□□□□ -0.32
UBP5P39944 BDF1YLR399C 2061 nt13.03□□□□□ -0.32
UBP5P39944 SCC4YER147C 1875 nt13.03□□□□□ -0.32
UBP5P39944 MOT3YMR070W 1473 nt13□□□□□ -0.33
UBP5P39944 DSK2YMR276W 1122 nt12.99□□□□□ -0.33
UBP5P39944 CUE1YMR264W 612 nt12.98□□□□□ -0.33
UBP5P39944 YCL048W-AYCL048W-A 240 nt12.95□□□□□ -0.34
UBP5P39944 FMP45YDL222C 930 nt12.94□□□□□ -0.34
UBP5P39944 IDH1YNL037C 1083 nt12.92□□□□□ -0.34
UBP5P39944 GBP2YCL011C 1284 nt12.89□□□□□ -0.35
UBP5P39944 IMP2'YIL154C 1041 nt12.88□□□□□ -0.35
UBP5P39944 LPX1YOR084W 1164 nt12.85□□□□□ -0.35
UBP5P39944 MXR2YCL033C 507 nt12.84□□□□□ -0.35
UBP5P39944 TAT1YBR069C 1860 nt12.84□□□□□ -0.35
UBP5P39944 YDR433WYDR433W 441 nt12.83□□□□□ -0.36
UBP5P39944 RRD1YIL153W 1182 nt12.8□□□□□ -0.36
UBP5P39944 DED1YOR204W 1815 nt12.79□□□□□ -0.36
UBP5P39944 YIL100WYIL100W 354 nt12.79□□□□□ -0.36
UBP5P39944 RRT12YCR045C 1476 nt12.78□□□□□ -0.36
UBP5P39944 YSC84YHR016C 1407 nt12.76□□□□□ -0.37
UBP5P39944 ERV46YAL042W 1248 nt12.73□□□□□ -0.37
UBP5P39944 TCD2YKL027W 1344 nt12.72□□□□□ -0.37
UBP5P39944 YHL050CYHL050C 2094 nt12.72□□□□□ -0.37
UBP5P39944 FMT1YBL013W 1206 nt12.7□□□□□ -0.38
UBP5P39944 SPP1YPL138C 1062 nt12.66□□□□□ -0.38
UBP5P39944 YKR040CYKR040C 504 nt12.65□□□□□ -0.38
UBP5P39944 YNL195CYNL195C 786 nt12.6□□□□□ -0.39
UBP5P39944 PCH2YBR186W 1695 nt12.58□□□□□ -0.4
UBP5P39944 SEC11YIR022W 504 nt12.55□□□□□ -0.4
UBP5P39944 FRD1YEL047C 1413 nt12.54□□□□□ -0.4
UBP5P39944 ADH2YMR303C 1047 nt12.54□□□□□ -0.4
UBP5P39944 GUT2YIL155C 1950 nt12.53□□□□□ -0.4
UBP5P39944 MRPL8YJL063C 717 nt12.53□□□□□ -0.4
UBP5P39944 CWP1YKL096W 720 nt12.53□□□□□ -0.4
UBP5P39944 PCM1YEL058W 1674 nt12.48□□□□□ -0.41
UBP5P39944 FMP52YER004W 696 nt12.48□□□□□ -0.41
UBP5P39944 SOR2YDL246C 1074 nt12.46□□□□□ -0.41
UBP5P39944 SOR1YJR159W 1074 nt12.46□□□□□ -0.41
UBP5P39944 YCL042WYCL042W 360 nt12.45□□□□□ -0.42
UBP5P39944 PIB2YGL023C 1908 nt12.42□□□□□ -0.42
UBP5P39944 YEL076C-AYEL076C-A 651 nt12.4□□□□□ -0.42
UBP5P39944 YEL076CYEL076C 651 nt12.4□□□□□ -0.42
UBP5P39944 YLR464WYLR464W 651 nt12.4□□□□□ -0.42
UBP5P39944 RTG1YOL067C 534 nt12.4□□□□□ -0.42
UBP5P39944 ADO1YJR105W 1023 nt12.39□□□□□ -0.43
UBP5P39944 LCB1YMR296C 1677 nt12.38□□□□□ -0.43
UBP5P39944 SNF6YHL025W 999 nt12.37□□□□□ -0.43
UBP5P39944 PTH1YHR189W 573 nt12.37□□□□□ -0.43
UBP5P39944 NCP1YHR042W 2076 nt12.34□□□□□ -0.43
UBP5P39944 RTF1YGL244W 1677 nt12.31□□□□□ -0.44
UBP5P39944 SIM1YIL123W 1431 nt12.3□□□□□ -0.44
UBP5P39944 BIO4YNR057C 714 nt12.28□□□□□ -0.44
UBP5P39944 BOP3YNL042W 1191 nt12.24□□□□□ -0.45
UBP5P39944 YIH1YCR059C 777 nt12.23□□□□□ -0.45
UBP5P39944 UBX6YJL048C 1191 nt12.22□□□□□ -0.45
UBP5P39944 DIC1YLR348C 897 nt12.22□□□□□ -0.45
UBP5P39944 RNQ1YCL028W 1218 nt12.2□□□□□ -0.46
UBP5P39944 PTK1YKL198C 1989 nt12.19□□□□□ -0.46
UBP5P39944 YLL053CYLL053C 459 nt12.19□□□□□ -0.46
UBP5P39944 HUA1YGR268C 597 nt12.17□□□□□ -0.46
UBP5P39944 YLR235CYLR235C 399 nt12.14□□□□□ -0.47
UBP5P39944 LYS4YDR234W 2082 nt12.12□□□□□ -0.47
UBP5P39944 YKL030WYKL030W 606 nt12.11□□□□□ -0.47
UBP5P39944 TIM23YNR017W 669 nt12.09□□□□□ -0.47
UBP5P39944 FTR1YER145C 1215 nt12.06□□□□□ -0.48
UBP5P39944 ATF2YGR177C 1608 nt12.06□□□□□ -0.48
UBP5P39944 GAL1YBR020W 1587 nt12.05□□□□□ -0.48
UBP5P39944 YLR179CYLR179C 606 nt12.05□□□□□ -0.48
UBP5P39944 TRM5YHR070W 1500 nt12.05□□□□□ -0.48
UBP5P39944 CRR1YLR213C 1269 nt12□□□□□ -0.49
UBP5P39944 ERF2YLR246W 1080 nt12□□□□□ -0.49
UBP5P39944 YDR094WYDR094W 336 nt11.99□□□□□ -0.49
UBP5P39944 WSC2YNL283C 1512 nt11.98□□□□□ -0.49
UBP5P39944 MIC10YCL057C-A 294 nt11.98□□□□□ -0.49
UBP5P39944 YFL054CYFL054C 1941 nt11.97□□□□□ -0.49
UBP5P39944 SNG1YGR197C 1644 nt11.92□□□□□ -0.5
Retrieved 100 of 7,029 protein–RNA pairs in 12.4 ms