Protein–RNA interactions for Protein: P39904

VPS52, Vacuolar protein sorting-associated protein 52, yeastyeast

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS52P39904 YHR165W-AYHR165W-A 312 nt11.41□□□□□ -0.58
VPS52P39904 YLR154C-GYLR154C-G 150 nt11.41□□□□□ -0.58
VPS52P39904 SIS1YNL007C 1059 nt11.36□□□□□ -0.59
VPS52P39904 IMP2'YIL154C 1041 nt11.35□□□□□ -0.59
VPS52P39904 DCW1YKL046C 1350 nt11.34□□□□□ -0.59
VPS52P39904 DSK2YMR276W 1122 nt11.29□□□□□ -0.6
VPS52P39904 RPP2AYOL039W 321 nt11.29□□□□□ -0.6
VPS52P39904 YJL152WYJL152W 360 nt11.26□□□□□ -0.61
VPS52P39904 BDF1YLR399C 2061 nt11.24□□□□□ -0.61
VPS52P39904 PTP1YDL230W 1008 nt11.24□□□□□ -0.61
VPS52P39904 YCH1YGR203W 447 nt11.2□□□□□ -0.62
VPS52P39904 FMP45YDL222C 930 nt11.18□□□□□ -0.62
VPS52P39904 MOT3YMR070W 1473 nt11.18□□□□□ -0.62
VPS52P39904 CAC2YML102W 1407 nt11.18□□□□□ -0.62
VPS52P39904 YLR236CYLR236C 324 nt11.16□□□□□ -0.62
VPS52P39904 YPR011CYPR011C 981 nt11.16□□□□□ -0.62
VPS52P39904 EMI2YDR516C 1503 nt11.15□□□□□ -0.62
VPS52P39904 TIR4YOR009W 1464 nt11.15□□□□□ -0.62
VPS52P39904 IDH1YNL037C 1083 nt11.15□□□□□ -0.62
VPS52P39904 PET9YBL030C 957 nt11.14□□□□□ -0.63
VPS52P39904 ART5YGR068C 1761 nt11.11□□□□□ -0.63
VPS52P39904 TAT1YBR069C 1860 nt11.09□□□□□ -0.63
VPS52P39904 YDL221WYDL221W 552 nt11.07□□□□□ -0.64
VPS52P39904 GFD2YCL036W 1701 nt11.05□□□□□ -0.64
VPS52P39904 PAC11YDR488C 1602 nt11.05□□□□□ -0.64
VPS52P39904 YMR057CYMR057C 372 nt11.04□□□□□ -0.64
VPS52P39904 ERV46YAL042W 1248 nt11.03□□□□□ -0.64
VPS52P39904 YCL048W-AYCL048W-A 240 nt11.02□□□□□ -0.65
VPS52P39904 GBP2YCL011C 1284 nt11.01□□□□□ -0.65
VPS52P39904 IRC15YPL017C 1500 nt11□□□□□ -0.65
VPS52P39904 YMR090WYMR090W 684 nt11□□□□□ -0.65
VPS52P39904 YBR220CYBR220C 1683 nt11□□□□□ -0.65
VPS52P39904 YDR433WYDR433W 441 nt10.99□□□□□ -0.65
VPS52P39904 LPX1YOR084W 1164 nt10.98□□□□□ -0.65
VPS52P39904 YKR040CYKR040C 504 nt10.95□□□□□ -0.66
VPS52P39904 SDH1YKL148C 1923 nt10.95□□□□□ -0.66
VPS52P39904 RTS2YOR077W 699 nt10.93□□□□□ -0.66
VPS52P39904 GIS3YLR094C 1509 nt10.92□□□□□ -0.66
VPS52P39904 TCD2YKL027W 1344 nt10.88□□□□□ -0.67
VPS52P39904 NVJ2YPR091C 2313 nt10.88□□□□□ -0.67
VPS52P39904 SCC4YER147C 1875 nt10.87□□□□□ -0.67
VPS52P39904 MRPL8YJL063C 717 nt10.85□□□□□ -0.67
VPS52P39904 FPS1YLL043W 2010 nt10.85□□□□□ -0.67
VPS52P39904 CUE1YMR264W 612 nt10.84□□□□□ -0.67
VPS52P39904 MXR2YCL033C 507 nt10.84□□□□□ -0.67
VPS52P39904 SPP1YPL138C 1062 nt10.79□□□□□ -0.68
VPS52P39904 RRD1YIL153W 1182 nt10.76□□□□□ -0.69
VPS52P39904 YIL100WYIL100W 354 nt10.74□□□□□ -0.69
VPS52P39904 ADO1YJR105W 1023 nt10.74□□□□□ -0.69
VPS52P39904 DED1YOR204W 1815 nt10.74□□□□□ -0.69
VPS52P39904 YEL076C-AYEL076C-A 651 nt10.69□□□□□ -0.7
VPS52P39904 YEL076CYEL076C 651 nt10.69□□□□□ -0.7
VPS52P39904 SEC11YIR022W 504 nt10.69□□□□□ -0.7
VPS52P39904 YLR464WYLR464W 651 nt10.69□□□□□ -0.7
VPS52P39904 FMP52YER004W 696 nt10.68□□□□□ -0.7
VPS52P39904 RTG1YOL067C 534 nt10.68□□□□□ -0.7
VPS52P39904 YCL042WYCL042W 360 nt10.68□□□□□ -0.7
VPS52P39904 FRD1YEL047C 1413 nt10.67□□□□□ -0.7
VPS52P39904 PCH2YBR186W 1695 nt10.66□□□□□ -0.7
VPS52P39904 SOR2YDL246C 1074 nt10.64□□□□□ -0.71
VPS52P39904 SOR1YJR159W 1074 nt10.64□□□□□ -0.71
VPS52P39904 FMT1YBL013W 1206 nt10.63□□□□□ -0.71
VPS52P39904 YSC84YHR016C 1407 nt10.63□□□□□ -0.71
VPS52P39904 YJL225CYJL225C 5277 nt10.61□□□□□ -0.71
VPS52P39904 GUT2YIL155C 1950 nt10.61□□□□□ -0.71
VPS52P39904 YHL050CYHL050C 2094 nt10.61□□□□□ -0.71
VPS52P39904 RRT12YCR045C 1476 nt10.59□□□□□ -0.71
VPS52P39904 Q0182Q0182 405 nt10.58□□□□□ -0.72
VPS52P39904 YNL195CYNL195C 786 nt10.57□□□□□ -0.72
VPS52P39904 HUA1YGR268C 597 nt10.56□□□□□ -0.72
VPS52P39904 YLR235CYLR235C 399 nt10.56□□□□□ -0.72
VPS52P39904 CWP1YKL096W 720 nt10.55□□□□□ -0.72
VPS52P39904 YKL030WYKL030W 606 nt10.51□□□□□ -0.73
VPS52P39904 PTH1YHR189W 573 nt10.5□□□□□ -0.73
VPS52P39904 ADH2YMR303C 1047 nt10.5□□□□□ -0.73
VPS52P39904 PCM1YEL058W 1674 nt10.47□□□□□ -0.73
VPS52P39904 SNF6YHL025W 999 nt10.46□□□□□ -0.73
VPS52P39904 PIB2YGL023C 1908 nt10.43□□□□□ -0.74
VPS52P39904 LCB1YMR296C 1677 nt10.41□□□□□ -0.74
VPS52P39904 DIC1YLR348C 897 nt10.38□□□□□ -0.75
VPS52P39904 RNQ1YCL028W 1218 nt10.38□□□□□ -0.75
VPS52P39904 YIH1YCR059C 777 nt10.37□□□□□ -0.75
VPS52P39904 TIM23YNR017W 669 nt10.37□□□□□ -0.75
VPS52P39904 RTF1YGL244W 1677 nt10.36□□□□□ -0.75
VPS52P39904 UBX6YJL048C 1191 nt10.34□□□□□ -0.75
VPS52P39904 NCP1YHR042W 2076 nt10.31□□□□□ -0.76
VPS52P39904 YDR094WYDR094W 336 nt10.31□□□□□ -0.76
VPS52P39904 YLR179CYLR179C 606 nt10.3□□□□□ -0.76
VPS52P39904 BOP3YNL042W 1191 nt10.29□□□□□ -0.76
VPS52P39904 RDN37-1RDN37-1 5354 nt10.29□□□□□ -0.76
VPS52P39904 RDN37-2RDN37-2 5354 nt10.29□□□□□ -0.76
VPS52P39904 SIM1YIL123W 1431 nt10.27□□□□□ -0.77
VPS52P39904 YPR064WYPR064W 420 nt10.27□□□□□ -0.77
VPS52P39904 tL(GAG)GtL(GAG)G 82 nt10.26□□□□□ -0.77
VPS52P39904 BIO4YNR057C 714 nt10.25□□□□□ -0.77
VPS52P39904 YLL053CYLL053C 459 nt10.24□□□□□ -0.77
VPS52P39904 AQY1YPR192W 918 nt10.23□□□□□ -0.77
VPS52P39904 PTK1YKL198C 1989 nt10.21□□□□□ -0.78
VPS52P39904 FTR1YER145C 1215 nt10.2□□□□□ -0.78
VPS52P39904 AHT1YHR093W 549 nt10.2□□□□□ -0.78
Retrieved 100 of 7,029 protein–RNA pairs in 15 ms