Protein–RNA interactions for Protein: P38428

CUE1, Coupling of ubiquitin conjugation to ER degradation protein 1, yeastyeast

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUE1P38428 EMI2YDR516C 1503 nt10.37□□□□□ -0.75
CUE1P38428 CAC2YML102W 1407 nt10.35□□□□□ -0.75
CUE1P38428 YOR139CYOR139C 393 nt10.34□□□□□ -0.75
CUE1P38428 SUF2tP(AGG)C 72 nt10.33□□□□□ -0.76
CUE1P38428 SUF10tP(AGG)N 72 nt10.33□□□□□ -0.76
CUE1P38428 NPL3YDR432W 1245 nt10.31□□□□□ -0.76
CUE1P38428 YDL221WYDL221W 552 nt10.29□□□□□ -0.76
CUE1P38428 YBR220CYBR220C 1683 nt10.27□□□□□ -0.77
CUE1P38428 FPS1YLL043W 2010 nt10.23□□□□□ -0.77
CUE1P38428 YMR090WYMR090W 684 nt10.23□□□□□ -0.77
CUE1P38428 IRC15YPL017C 1500 nt10.22□□□□□ -0.77
CUE1P38428 GFD2YCL036W 1701 nt10.21□□□□□ -0.78
CUE1P38428 ART5YGR068C 1761 nt10.2□□□□□ -0.78
CUE1P38428 SDH1YKL148C 1923 nt10.19□□□□□ -0.78
CUE1P38428 YOL037CYOL037C 354 nt10.18□□□□□ -0.78
CUE1P38428 TIR4YOR009W 1464 nt10.15□□□□□ -0.78
CUE1P38428 PET9YBL030C 957 nt10.13□□□□□ -0.79
CUE1P38428 GIS3YLR094C 1509 nt10.12□□□□□ -0.79
CUE1P38428 PCH2YBR186W 1695 nt10.12□□□□□ -0.79
CUE1P38428 SEC11YIR022W 504 nt10.1□□□□□ -0.79
CUE1P38428 SCC4YER147C 1875 nt10.09□□□□□ -0.79
CUE1P38428 GUT2YIL155C 1950 nt10.09□□□□□ -0.79
CUE1P38428 YCH1YGR203W 447 nt10.08□□□□□ -0.8
CUE1P38428 RTS2YOR077W 699 nt10.07□□□□□ -0.8
CUE1P38428 YLR154C-GYLR154C-G 150 nt10.05□□□□□ -0.8
CUE1P38428 YMR057CYMR057C 372 nt10.01□□□□□ -0.81
CUE1P38428 CUE1YMR264W 612 nt9.99□□□□□ -0.81
CUE1P38428 YLR281CYLR281C 468 nt9.98□□□□□ -0.81
CUE1P38428 WHI5YOR083W 888 nt9.96□□□□□ -0.82
CUE1P38428 tM(CAU)CtM(CAU)C 72 nt9.94□□□□□ -0.82
CUE1P38428 IMT4tM(CAU)E 72 nt9.94□□□□□ -0.82
CUE1P38428 IMT3tM(CAU)J3 72 nt9.94□□□□□ -0.82
CUE1P38428 IMT1tM(CAU)O1 72 nt9.94□□□□□ -0.82
CUE1P38428 IMT2tM(CAU)P 72 nt9.94□□□□□ -0.82
CUE1P38428 YJL152WYJL152W 360 nt9.93□□□□□ -0.82
CUE1P38428 PUS2YGL063W 1113 nt9.88□□□□□ -0.83
CUE1P38428 YSC84YHR016C 1407 nt9.87□□□□□ -0.83
CUE1P38428 PIB2YGL023C 1908 nt9.86□□□□□ -0.83
CUE1P38428 YHL050CYHL050C 2094 nt9.86□□□□□ -0.83
CUE1P38428 YCL048W-AYCL048W-A 240 nt9.82□□□□□ -0.84
CUE1P38428 UME6YDR207C 2511 nt9.82□□□□□ -0.84
CUE1P38428 RRT12YCR045C 1476 nt9.81□□□□□ -0.84
CUE1P38428 YIL100WYIL100W 354 nt9.81□□□□□ -0.84
CUE1P38428 YLR236CYLR236C 324 nt9.8□□□□□ -0.84
CUE1P38428 RTF1YGL244W 1677 nt9.78□□□□□ -0.84
CUE1P38428 BOR1YNL275W 1731 nt9.76□□□□□ -0.85
CUE1P38428 YPR011CYPR011C 981 nt9.75□□□□□ -0.85
CUE1P38428 IDH1YNL037C 1083 nt9.74□□□□□ -0.85
CUE1P38428 RRD1YIL153W 1182 nt9.73□□□□□ -0.85
CUE1P38428 DSK2YMR276W 1122 nt9.72□□□□□ -0.85
CUE1P38428 IMP2'YIL154C 1041 nt9.71□□□□□ -0.86
CUE1P38428 YNL195CYNL195C 786 nt9.7□□□□□ -0.86
CUE1P38428 GBP2YCL011C 1284 nt9.7□□□□□ -0.86
CUE1P38428 DED1YOR204W 1815 nt9.69□□□□□ -0.86
CUE1P38428 BOP3YNL042W 1191 nt9.67□□□□□ -0.86
CUE1P38428 FMP45YDL222C 930 nt9.64□□□□□ -0.87
CUE1P38428 MOT3YMR070W 1473 nt9.63□□□□□ -0.87
CUE1P38428 FMT1YBL013W 1206 nt9.61□□□□□ -0.87
CUE1P38428 NCP1YHR042W 2076 nt9.6□□□□□ -0.87
CUE1P38428 TCD2YKL027W 1344 nt9.6□□□□□ -0.87
CUE1P38428 FMP52YER004W 696 nt9.6□□□□□ -0.87
CUE1P38428 PTK1YKL198C 1989 nt9.6□□□□□ -0.87
CUE1P38428 ERV46YAL042W 1248 nt9.59□□□□□ -0.87
CUE1P38428 LPX1YOR084W 1164 nt9.57□□□□□ -0.88
CUE1P38428 MXR2YCL033C 507 nt9.57□□□□□ -0.88
CUE1P38428 YDR433WYDR433W 441 nt9.56□□□□□ -0.88
CUE1P38428 LCB1YMR296C 1677 nt9.54□□□□□ -0.88
CUE1P38428 PCM1YEL058W 1674 nt9.51□□□□□ -0.89
CUE1P38428 SOR2YDL246C 1074 nt9.51□□□□□ -0.89
CUE1P38428 SOR1YJR159W 1074 nt9.51□□□□□ -0.89
CUE1P38428 YKR040CYKR040C 504 nt9.5□□□□□ -0.89
CUE1P38428 ADH2YMR303C 1047 nt9.48□□□□□ -0.89
CUE1P38428 MCH5YOR306C 1566 nt9.48□□□□□ -0.89
CUE1P38428 CWP1YKL096W 720 nt9.46□□□□□ -0.9
CUE1P38428 FRD1YEL047C 1413 nt9.46□□□□□ -0.9
CUE1P38428 SIM1YIL123W 1431 nt9.4□□□□□ -0.9
CUE1P38428 ALG12YNR030W 1656 nt9.4□□□□□ -0.9
CUE1P38428 SNF6YHL025W 999 nt9.4□□□□□ -0.9
CUE1P38428 BIO4YNR057C 714 nt9.4□□□□□ -0.9
CUE1P38428 YCL042WYCL042W 360 nt9.39□□□□□ -0.91
CUE1P38428 SPT8YLR055C 1809 nt9.38□□□□□ -0.91
CUE1P38428 YFL054CYFL054C 1941 nt9.37□□□□□ -0.91
CUE1P38428 LYS4YDR234W 2082 nt9.36□□□□□ -0.91
CUE1P38428 YIH1YCR059C 777 nt9.36□□□□□ -0.91
CUE1P38428 SPP1YPL138C 1062 nt9.33□□□□□ -0.92
CUE1P38428 HSP60YLR259C 1719 nt9.32□□□□□ -0.92
CUE1P38428 RNQ1YCL028W 1218 nt9.31□□□□□ -0.92
CUE1P38428 YLL053CYLL053C 459 nt9.27□□□□□ -0.93
CUE1P38428 MRPL8YJL063C 717 nt9.26□□□□□ -0.93
CUE1P38428 CRR1YLR213C 1269 nt9.26□□□□□ -0.93
CUE1P38428 ERF2YLR246W 1080 nt9.24□□□□□ -0.93
CUE1P38428 DIC1YLR348C 897 nt9.24□□□□□ -0.93
CUE1P38428 ATF2YGR177C 1608 nt9.21□□□□□ -0.93
CUE1P38428 RPM1RPM1 483 nt9.21□□□□□ -0.94
CUE1P38428 FTR1YER145C 1215 nt9.2□□□□□ -0.94
CUE1P38428 PTH1YHR189W 573 nt9.2□□□□□ -0.94
CUE1P38428 ADO1YJR105W 1023 nt9.19□□□□□ -0.94
CUE1P38428 YEL076C-AYEL076C-A 651 nt9.18□□□□□ -0.94
CUE1P38428 YEL076CYEL076C 651 nt9.18□□□□□ -0.94
CUE1P38428 YLR464WYLR464W 651 nt9.18□□□□□ -0.94
Retrieved 100 of 7,029 protein–RNA pairs in 18 ms