Protein–RNA interactions for Protein: P36100

TFA1, Transcription initiation factor IIE subunit alpha, yeastyeast

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TFA1P36100 YJR120WYJR120W 351 nt16.38■□□□□ 0.21
TFA1P36100 FPR4YLR449W 1179 nt16.36■□□□□ 0.21
TFA1P36100 MEP2YNL142W 1500 nt16.29■□□□□ 0.2
TFA1P36100 FIS1YIL065C 468 nt16.25■□□□□ 0.19
TFA1P36100 DAL1YIR027C 1383 nt16.25■□□□□ 0.19
TFA1P36100 FAF1YIL019W 1041 nt16.24■□□□□ 0.19
TFA1P36100 RPP2BYDR382W 333 nt16.23■□□□□ 0.19
TFA1P36100 NAS6YGR232W 687 nt16.2■□□□□ 0.18
TFA1P36100 FPS1YLL043W 2010 nt16.19■□□□□ 0.18
TFA1P36100 PUS5YLR165C 765 nt16.18■□□□□ 0.18
TFA1P36100 STB1YNL309W 1263 nt16.18■□□□□ 0.18
TFA1P36100 BNS1YGR230W 414 nt16.17■□□□□ 0.18
TFA1P36100 SRB2YHR041C 633 nt16.14■□□□□ 0.17
TFA1P36100 YPL071CYPL071C 471 nt16.14■□□□□ 0.17
TFA1P36100 FHN1YGR131W 525 nt16.13■□□□□ 0.17
TFA1P36100 INM2YDR287W 879 nt16.11■□□□□ 0.17
TFA1P36100 BDF1YLR399C 2061 nt16.1■□□□□ 0.17
TFA1P36100 PHO4YFR034C 939 nt16.1■□□□□ 0.17
TFA1P36100 REC114YMR133W 1287 nt16.09■□□□□ 0.17
TFA1P36100 XDJ1YLR090W 1380 nt16.08■□□□□ 0.16
TFA1P36100 DCW1YKL046C 1350 nt16.05■□□□□ 0.16
TFA1P36100 UTP6YDR449C 1323 nt16.05■□□□□ 0.16
TFA1P36100 SHU1YHL006C 453 nt16.05■□□□□ 0.16
TFA1P36100 YHR165W-AYHR165W-A 312 nt16.02■□□□□ 0.16
TFA1P36100 YPS1YLR120C 1710 nt16.02■□□□□ 0.15
TFA1P36100 ATG17YLR423C 1254 nt15.99■□□□□ 0.15
TFA1P36100 ARP10YDR106W 855 nt15.97■□□□□ 0.15
TFA1P36100 YKL097CYKL097C 411 nt15.95■□□□□ 0.14
TFA1P36100 BDH2YAL061W 1254 nt15.94■□□□□ 0.14
TFA1P36100 TAT1YBR069C 1860 nt15.89■□□□□ 0.13
TFA1P36100 SEM1YDR363W-A 270 nt15.85■□□□□ 0.13
TFA1P36100 YMR090WYMR090W 684 nt15.85■□□□□ 0.13
TFA1P36100 YBL100CYBL100C 315 nt15.85■□□□□ 0.13
TFA1P36100 KDX1YKL161C 1302 nt15.85■□□□□ 0.13
TFA1P36100 WWM1YFL010C 636 nt15.84■□□□□ 0.13
TFA1P36100 YGR021WYGR021W 873 nt15.83■□□□□ 0.12
TFA1P36100 EMI2YDR516C 1503 nt15.83■□□□□ 0.12
TFA1P36100 MAS1YLR163C 1389 nt15.78■□□□□ 0.12
TFA1P36100 YDR095CYDR095C 411 nt15.78■□□□□ 0.12
TFA1P36100 LSM3YLR438C-A 270 nt15.77■□□□□ 0.12
TFA1P36100 HOM6YJR139C 1080 nt15.75■□□□□ 0.11
TFA1P36100 BSP1YPR171W 1731 nt15.74■□□□□ 0.11
TFA1P36100 YBR220CYBR220C 1683 nt15.73■□□□□ 0.11
TFA1P36100 YFL021C-AYFL021C-A 855 nt15.72■□□□□ 0.11
TFA1P36100 YAL037C-BYAL037C-B 975 nt15.71■□□□□ 0.11
TFA1P36100 FUN26YAL022C 1554 nt15.67■□□□□ 0.1
TFA1P36100 YDL221WYDL221W 552 nt15.62■□□□□ 0.09
TFA1P36100 RMA1YKL132C 1293 nt15.61■□□□□ 0.09
TFA1P36100 SKG1YKR100C 1068 nt15.61■□□□□ 0.09
TFA1P36100 ALF1YNL148C 765 nt15.61■□□□□ 0.09
TFA1P36100 TRM9YML014W 840 nt15.6■□□□□ 0.09
TFA1P36100 AST1YBL069W 1290 nt15.6■□□□□ 0.09
TFA1P36100 YJL107CYJL107C 1164 nt15.56■□□□□ 0.08
TFA1P36100 SWP1YMR149W 861 nt15.56■□□□□ 0.08
TFA1P36100 SDH1YKL148C 1923 nt15.56■□□□□ 0.08
TFA1P36100 NVJ2YPR091C 2313 nt15.56■□□□□ 0.08
TFA1P36100 CCT6YDR188W 1641 nt15.55■□□□□ 0.08
TFA1P36100 CAC2YML102W 1407 nt15.55■□□□□ 0.08
TFA1P36100 YJL211CYJL211C 444 nt15.54■□□□□ 0.08
TFA1P36100 RPP2AYOL039W 321 nt15.54■□□□□ 0.08
TFA1P36100 PAC11YDR488C 1602 nt15.54■□□□□ 0.08
TFA1P36100 PUS7YOR243C 2031 nt15.52■□□□□ 0.08
TFA1P36100 YDR306CYDR306C 1437 nt15.51■□□□□ 0.07
TFA1P36100 HOS2YGL194C 1359 nt15.51■□□□□ 0.07
TFA1P36100 MNP1YGL068W 585 nt15.51■□□□□ 0.07
TFA1P36100 COX16YJL003W 357 nt15.49■□□□□ 0.07
TFA1P36100 RKM5YLR137W 1104 nt15.49■□□□□ 0.07
TFA1P36100 YNL165WYNL165W 1221 nt15.49■□□□□ 0.07
TFA1P36100 RSM23YGL129C 1353 nt15.49■□□□□ 0.07
TFA1P36100 EEB1YPL095C 1371 nt15.49■□□□□ 0.07
TFA1P36100 PTP1YDL230W 1008 nt15.47■□□□□ 0.07
TFA1P36100 YNL115CYNL115C 1935 nt15.44■□□□□ 0.06
TFA1P36100 MCM5YLR274W 2328 nt15.43■□□□□ 0.06
TFA1P36100 RDN37-1RDN37-1 5354 nt15.42■□□□□ 0.06
TFA1P36100 RDN37-2RDN37-2 5354 nt15.42■□□□□ 0.06
TFA1P36100 SUF2tP(AGG)C 72 nt15.4■□□□□ 0.06
TFA1P36100 SUF10tP(AGG)N 72 nt15.4■□□□□ 0.06
TFA1P36100 YNR068CYNR068C 819 nt15.39■□□□□ 0.05
TFA1P36100 SCC4YER147C 1875 nt15.38■□□□□ 0.05
TFA1P36100 YDR509WYDR509W 348 nt15.38■□□□□ 0.05
TFA1P36100 THP3YPR045C 1413 nt15.37■□□□□ 0.05
TFA1P36100 YOL037CYOL037C 354 nt15.37■□□□□ 0.05
TFA1P36100 YOR139CYOR139C 393 nt15.37■□□□□ 0.05
TFA1P36100 Q0144Q0144 330 nt15.35■□□□□ 0.05
TFA1P36100 YJL225CYJL225C 5277 nt15.35■□□□□ 0.05
TFA1P36100 APM1YPL259C 1428 nt15.34■□□□□ 0.05
TFA1P36100 snR78snR78 87 nt15.34■□□□□ 0.05
TFA1P36100 SIS1YNL007C 1059 nt15.34■□□□□ 0.05
TFA1P36100 PCH2YBR186W 1695 nt15.33■□□□□ 0.04
TFA1P36100 ATG22YCL038C 1587 nt15.32■□□□□ 0.04
TFA1P36100 YMR147WYMR147W 672 nt15.32■□□□□ 0.04
TFA1P36100 IDP3YNL009W 1263 nt15.31■□□□□ 0.04
TFA1P36100 PET20YPL159C 762 nt15.31■□□□□ 0.04
TFA1P36100 SEC11YIR022W 504 nt15.3■□□□□ 0.04
TFA1P36100 IRC15YPL017C 1500 nt15.29■□□□□ 0.04
TFA1P36100 YGL118CYGL118C 438 nt15.29■□□□□ 0.04
TFA1P36100 SCO2YBR024W 906 nt15.28■□□□□ 0.04
TFA1P36100 GIS3YLR094C 1509 nt15.25■□□□□ 0.03
TFA1P36100 GUT2YIL155C 1950 nt15.24■□□□□ 0.03
TFA1P36100 NPL3YDR432W 1245 nt15.22■□□□□ 0.03
Retrieved 100 of 7,029 protein–RNA pairs in 12.8 ms