Protein–RNA interactions for Protein: P25655

CDC39, General negative regulator of transcription subunit 1, yeastyeast

Known RBP Predictions only

Length 2,108 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC39P25655 FMP45YDL222C 930 nt10.82□□□□□ -0.68
CDC39P25655 FUN26YAL022C 1554 nt10.82□□□□□ -0.68
CDC39P25655 ALF1YNL148C 765 nt10.8□□□□□ -0.68
CDC39P25655 YLR154C-GYLR154C-G 150 nt10.79□□□□□ -0.68
CDC39P25655 SUF2tP(AGG)C 72 nt10.78□□□□□ -0.68
CDC39P25655 SUF10tP(AGG)N 72 nt10.78□□□□□ -0.68
CDC39P25655 DSK2YMR276W 1122 nt10.78□□□□□ -0.68
CDC39P25655 IMP2'YIL154C 1041 nt10.76□□□□□ -0.69
CDC39P25655 PTP1YDL230W 1008 nt10.75□□□□□ -0.69
CDC39P25655 EMI2YDR516C 1503 nt10.75□□□□□ -0.69
CDC39P25655 YHR165W-AYHR165W-A 312 nt10.74□□□□□ -0.69
CDC39P25655 RTG1YOL067C 534 nt10.7□□□□□ -0.7
CDC39P25655 SIS1YNL007C 1059 nt10.69□□□□□ -0.7
CDC39P25655 RPP2AYOL039W 321 nt10.67□□□□□ -0.7
CDC39P25655 ERV46YAL042W 1248 nt10.66□□□□□ -0.7
CDC39P25655 LPX1YOR084W 1164 nt10.64□□□□□ -0.71
CDC39P25655 ART5YGR068C 1761 nt10.64□□□□□ -0.71
CDC39P25655 GFD2YCL036W 1701 nt10.63□□□□□ -0.71
CDC39P25655 MRPL8YJL063C 717 nt10.58□□□□□ -0.72
CDC39P25655 TIR4YOR009W 1464 nt10.55□□□□□ -0.72
CDC39P25655 CAC2YML102W 1407 nt10.53□□□□□ -0.72
CDC39P25655 YJL152WYJL152W 360 nt10.52□□□□□ -0.72
CDC39P25655 ADO1YJR105W 1023 nt10.52□□□□□ -0.72
CDC39P25655 YCH1YGR203W 447 nt10.52□□□□□ -0.73
CDC39P25655 SPP1YPL138C 1062 nt10.52□□□□□ -0.73
CDC39P25655 YEL076C-AYEL076C-A 651 nt10.51□□□□□ -0.73
CDC39P25655 YEL076CYEL076C 651 nt10.51□□□□□ -0.73
CDC39P25655 YLR464WYLR464W 651 nt10.51□□□□□ -0.73
CDC39P25655 IRC15YPL017C 1500 nt10.49□□□□□ -0.73
CDC39P25655 SDH1YKL148C 1923 nt10.47□□□□□ -0.73
CDC39P25655 PET9YBL030C 957 nt10.46□□□□□ -0.73
CDC39P25655 MXR2YCL033C 507 nt10.45□□□□□ -0.74
CDC39P25655 BDF1YLR399C 2061 nt10.45□□□□□ -0.74
CDC39P25655 YMR057CYMR057C 372 nt10.43□□□□□ -0.74
CDC39P25655 UBX6YJL048C 1191 nt10.42□□□□□ -0.74
CDC39P25655 YMR090WYMR090W 684 nt10.41□□□□□ -0.74
CDC39P25655 CUE1YMR264W 612 nt10.41□□□□□ -0.74
CDC39P25655 GBP2YCL011C 1284 nt10.4□□□□□ -0.74
CDC39P25655 IDH1YNL037C 1083 nt10.39□□□□□ -0.75
CDC39P25655 RTS2YOR077W 699 nt10.39□□□□□ -0.75
CDC39P25655 YDL221WYDL221W 552 nt10.39□□□□□ -0.75
CDC39P25655 YKR040CYKR040C 504 nt10.39□□□□□ -0.75
CDC39P25655 YBR220CYBR220C 1683 nt10.38□□□□□ -0.75
CDC39P25655 SCC4YER147C 1875 nt10.36□□□□□ -0.75
CDC39P25655 YSC84YHR016C 1407 nt10.34□□□□□ -0.75
CDC39P25655 FPS1YLL043W 2010 nt10.32□□□□□ -0.76
CDC39P25655 GIS3YLR094C 1509 nt10.32□□□□□ -0.76
CDC39P25655 YDR094WYDR094W 336 nt10.3□□□□□ -0.76
CDC39P25655 YDR433WYDR433W 441 nt10.28□□□□□ -0.76
CDC39P25655 RRT12YCR045C 1476 nt10.27□□□□□ -0.76
CDC39P25655 YFL015W-AYFL015W-A 318 nt10.24□□□□□ -0.77
CDC39P25655 TAT1YBR069C 1860 nt10.22□□□□□ -0.77
CDC39P25655 DED1YOR204W 1815 nt10.22□□□□□ -0.77
CDC39P25655 YCL048W-AYCL048W-A 240 nt10.21□□□□□ -0.77
CDC39P25655 YHL050CYHL050C 2094 nt10.19□□□□□ -0.78
CDC39P25655 TCD2YKL027W 1344 nt10.18□□□□□ -0.78
CDC39P25655 RRD1YIL153W 1182 nt10.17□□□□□ -0.78
CDC39P25655 HUA1YGR268C 597 nt10.16□□□□□ -0.78
CDC39P25655 FRD1YEL047C 1413 nt10.16□□□□□ -0.78
CDC39P25655 PTH1YHR189W 573 nt10.13□□□□□ -0.79
CDC39P25655 FMT1YBL013W 1206 nt10.1□□□□□ -0.79
CDC39P25655 SOR2YDL246C 1074 nt10.07□□□□□ -0.8
CDC39P25655 SOR1YJR159W 1074 nt10.07□□□□□ -0.8
CDC39P25655 YIL100WYIL100W 354 nt10.05□□□□□ -0.8
CDC39P25655 FMP52YER004W 696 nt10.01□□□□□ -0.81
CDC39P25655 PRE6YOL038W 765 nt10.01□□□□□ -0.81
CDC39P25655 PAU16YKL224C 372 nt10.01□□□□□ -0.81
CDC39P25655 YFR018CYFR018C 1092 nt9.98□□□□□ -0.81
CDC39P25655 YNL195CYNL195C 786 nt9.97□□□□□ -0.81
CDC39P25655 PIB2YGL023C 1908 nt9.96□□□□□ -0.81
CDC39P25655 LCB1YMR296C 1677 nt9.93□□□□□ -0.82
CDC39P25655 YLR235CYLR235C 399 nt9.92□□□□□ -0.82
CDC39P25655 PCH2YBR186W 1695 nt9.92□□□□□ -0.82
CDC39P25655 YKL030WYKL030W 606 nt9.91□□□□□ -0.82
CDC39P25655 YCL042WYCL042W 360 nt9.9□□□□□ -0.82
CDC39P25655 SEC11YIR022W 504 nt9.89□□□□□ -0.83
CDC39P25655 ADH2YMR303C 1047 nt9.87□□□□□ -0.83
CDC39P25655 CWP1YKL096W 720 nt9.86□□□□□ -0.83
CDC39P25655 TIM23YNR017W 669 nt9.86□□□□□ -0.83
CDC39P25655 PCM1YEL058W 1674 nt9.85□□□□□ -0.83
CDC39P25655 ATF2YGR177C 1608 nt9.84□□□□□ -0.83
CDC39P25655 RTF1YGL244W 1677 nt9.83□□□□□ -0.84
CDC39P25655 GUT2YIL155C 1950 nt9.82□□□□□ -0.84
CDC39P25655 YIH1YCR059C 777 nt9.82□□□□□ -0.84
CDC39P25655 SBA1YKL117W 651 nt9.81□□□□□ -0.84
CDC39P25655 NCP1YHR042W 2076 nt9.8□□□□□ -0.84
CDC39P25655 YLL053CYLL053C 459 nt9.77□□□□□ -0.84
CDC39P25655 BIO4YNR057C 714 nt9.77□□□□□ -0.84
CDC39P25655 YLR179CYLR179C 606 nt9.77□□□□□ -0.85
CDC39P25655 YPR064WYPR064W 420 nt9.77□□□□□ -0.85
CDC39P25655 YFL066CYFL066C 1179 nt9.76□□□□□ -0.85
CDC39P25655 tL(GAG)GtL(GAG)G 82 nt9.76□□□□□ -0.85
CDC39P25655 FTR1YER145C 1215 nt9.73□□□□□ -0.85
CDC39P25655 RRT5YFR032C 870 nt9.73□□□□□ -0.85
CDC39P25655 SNF6YHL025W 999 nt9.71□□□□□ -0.85
CDC39P25655 SIM1YIL123W 1431 nt9.7□□□□□ -0.86
CDC39P25655 DIC1YLR348C 897 nt9.68□□□□□ -0.86
CDC39P25655 LYS4YDR234W 2082 nt9.68□□□□□ -0.86
CDC39P25655 BOP3YNL042W 1191 nt9.68□□□□□ -0.86
CDC39P25655 PTK1YKL198C 1989 nt9.67□□□□□ -0.86
Retrieved 100 of 7,029 protein–RNA pairs in 12.5 ms