Protein–RNA interactions for Protein: P22516

CHL1, ATP-dependent DNA helicase CHL1, yeastyeast

Predicted RBP Predictions only

Length 861 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CHL1P22516 INM2YDR287W 879 nt12.65□□□□□ -0.38
CHL1P22516 tM(CAU)CtM(CAU)C 72 nt12.63□□□□□ -0.39
CHL1P22516 IMT4tM(CAU)E 72 nt12.63□□□□□ -0.39
CHL1P22516 IMT3tM(CAU)J3 72 nt12.63□□□□□ -0.39
CHL1P22516 IMT1tM(CAU)O1 72 nt12.63□□□□□ -0.39
CHL1P22516 IMT2tM(CAU)P 72 nt12.63□□□□□ -0.39
CHL1P22516 LSM3YLR438C-A 270 nt12.63□□□□□ -0.39
CHL1P22516 YCR099CYCR099C 468 nt12.59□□□□□ -0.39
CHL1P22516 ATP6Q0085 780 nt12.57□□□□□ -0.4
CHL1P22516 FPR4YLR449W 1179 nt12.57□□□□□ -0.4
CHL1P22516 DAL1YIR027C 1383 nt12.56□□□□□ -0.4
CHL1P22516 YBL100CYBL100C 315 nt12.56□□□□□ -0.4
CHL1P22516 ARP10YDR106W 855 nt12.5□□□□□ -0.41
CHL1P22516 PUS2YGL063W 1113 nt12.49□□□□□ -0.41
CHL1P22516 YLR281CYLR281C 468 nt12.49□□□□□ -0.41
CHL1P22516 FIS1YIL065C 468 nt12.48□□□□□ -0.41
CHL1P22516 TRM9YML014W 840 nt12.47□□□□□ -0.41
CHL1P22516 PHO4YFR034C 939 nt12.43□□□□□ -0.42
CHL1P22516 AIR1YIL079C 1083 nt12.42□□□□□ -0.42
CHL1P22516 WHI5YOR083W 888 nt12.42□□□□□ -0.42
CHL1P22516 PET20YPL159C 762 nt12.42□□□□□ -0.42
CHL1P22516 FUN26YAL022C 1554 nt12.4□□□□□ -0.42
CHL1P22516 ARA2YMR041C 1008 nt12.29□□□□□ -0.44
CHL1P22516 CCT6YDR188W 1641 nt12.29□□□□□ -0.44
CHL1P22516 SUF2tP(AGG)C 72 nt12.22□□□□□ -0.45
CHL1P22516 SUF10tP(AGG)N 72 nt12.22□□□□□ -0.45
CHL1P22516 YLR154C-GYLR154C-G 150 nt12.22□□□□□ -0.45
CHL1P22516 ALF1YNL148C 765 nt12.22□□□□□ -0.45
CHL1P22516 IMP2'YIL154C 1041 nt12.21□□□□□ -0.45
CHL1P22516 DSK2YMR276W 1122 nt12.2□□□□□ -0.46
CHL1P22516 YNR068CYNR068C 819 nt12.2□□□□□ -0.46
CHL1P22516 KTR3YBR205W 1215 nt12.19□□□□□ -0.46
CHL1P22516 FMP45YDL222C 930 nt12.17□□□□□ -0.46
CHL1P22516 SPT5YML010W 3192 nt12.17□□□□□ -0.46
CHL1P22516 snR78snR78 87 nt12.15□□□□□ -0.46
CHL1P22516 ABZ2YMR289W 1125 nt12.11□□□□□ -0.47
CHL1P22516 NEM1YHR004C 1341 nt12.11□□□□□ -0.47
CHL1P22516 PHO92YDR374C 921 nt12.09□□□□□ -0.47
CHL1P22516 YLR236CYLR236C 324 nt12.09□□□□□ -0.47
CHL1P22516 YPR011CYPR011C 981 nt12.09□□□□□ -0.47
CHL1P22516 SSA4YER103W 1929 nt12.07□□□□□ -0.48
CHL1P22516 YCH1YGR203W 447 nt12.07□□□□□ -0.48
CHL1P22516 YPS1YLR120C 1710 nt12.07□□□□□ -0.48
CHL1P22516 YJL152WYJL152W 360 nt12.06□□□□□ -0.48
CHL1P22516 YDR095CYDR095C 411 nt12.05□□□□□ -0.48
CHL1P22516 YLR122CYLR122C 378 nt12.03□□□□□ -0.48
CHL1P22516 UTP6YDR449C 1323 nt12.02□□□□□ -0.49
CHL1P22516 SKG1YKR100C 1068 nt11.99□□□□□ -0.49
CHL1P22516 YPL168WYPL168W 1293 nt11.98□□□□□ -0.49
CHL1P22516 YHR165W-AYHR165W-A 312 nt11.97□□□□□ -0.49
CHL1P22516 SIS1YNL007C 1059 nt11.96□□□□□ -0.49
CHL1P22516 IDH1YNL037C 1083 nt11.96□□□□□ -0.49
CHL1P22516 MEP2YNL142W 1500 nt11.96□□□□□ -0.5
CHL1P22516 YEL009C-AYEL009C-A 408 nt11.92□□□□□ -0.5
CHL1P22516 YHL044WYHL044W 708 nt11.92□□□□□ -0.5
CHL1P22516 MRPL8YJL063C 717 nt11.92□□□□□ -0.5
CHL1P22516 AST1YBL069W 1290 nt11.91□□□□□ -0.5
CHL1P22516 ERV46YAL042W 1248 nt11.89□□□□□ -0.51
CHL1P22516 LPX1YOR084W 1164 nt11.89□□□□□ -0.51
CHL1P22516 YDR433WYDR433W 441 nt11.85□□□□□ -0.51
CHL1P22516 RPP2AYOL039W 321 nt11.85□□□□□ -0.51
CHL1P22516 TIR4YOR009W 1464 nt11.84□□□□□ -0.51
CHL1P22516 STD1YOR047C 1335 nt11.84□□□□□ -0.51
CHL1P22516 RPM1RPM1 483 nt11.83□□□□□ -0.52
CHL1P22516 GBP2YCL011C 1284 nt11.8□□□□□ -0.52
CHL1P22516 ADO1YJR105W 1023 nt11.79□□□□□ -0.52
CHL1P22516 YKR040CYKR040C 504 nt11.78□□□□□ -0.52
CHL1P22516 DCW1YKL046C 1350 nt11.78□□□□□ -0.52
CHL1P22516 URE2YNL229C 1065 nt11.76□□□□□ -0.53
CHL1P22516 SPP1YPL138C 1062 nt11.75□□□□□ -0.53
CHL1P22516 BDF1YLR399C 2061 nt11.75□□□□□ -0.53
CHL1P22516 PTP1YDL230W 1008 nt11.74□□□□□ -0.53
CHL1P22516 PAC11YDR488C 1602 nt11.74□□□□□ -0.53
CHL1P22516 ART5YGR068C 1761 nt11.73□□□□□ -0.53
CHL1P22516 CAC2YML102W 1407 nt11.73□□□□□ -0.53
CHL1P22516 PET9YBL030C 957 nt11.73□□□□□ -0.53
CHL1P22516 YCL048W-AYCL048W-A 240 nt11.72□□□□□ -0.53
CHL1P22516 YEL076C-AYEL076C-A 651 nt11.71□□□□□ -0.53
CHL1P22516 YEL076CYEL076C 651 nt11.71□□□□□ -0.53
CHL1P22516 YLR464WYLR464W 651 nt11.71□□□□□ -0.53
CHL1P22516 YMR057CYMR057C 372 nt11.7□□□□□ -0.54
CHL1P22516 PEX27YOR193W 1131 nt11.7□□□□□ -0.54
CHL1P22516 YAL016C-BYAL016C-B 186 nt11.69□□□□□ -0.54
CHL1P22516 FAR3YMR052W 615 nt11.69□□□□□ -0.54
CHL1P22516 YMR119W-AYMR119W-A 375 nt11.67□□□□□ -0.54
CHL1P22516 MXR2YCL033C 507 nt11.67□□□□□ -0.54
CHL1P22516 RTG1YOL067C 534 nt11.65□□□□□ -0.54
CHL1P22516 GFD2YCL036W 1701 nt11.64□□□□□ -0.55
CHL1P22516 TCD2YKL027W 1344 nt11.63□□□□□ -0.55
CHL1P22516 YDR008CYDR008C 351 nt11.63□□□□□ -0.55
CHL1P22516 GTT3YEL017W 1014 nt11.63□□□□□ -0.55
CHL1P22516 EMI2YDR516C 1503 nt11.62□□□□□ -0.55
CHL1P22516 TOM20YGR082W 552 nt11.6□□□□□ -0.55
CHL1P22516 FTR1YER145C 1215 nt11.58□□□□□ -0.56
CHL1P22516 YPL071CYPL071C 471 nt11.57□□□□□ -0.56
CHL1P22516 TAT1YBR069C 1860 nt11.56□□□□□ -0.56
CHL1P22516 NVJ2YPR091C 2313 nt11.54□□□□□ -0.56
CHL1P22516 YDL221WYDL221W 552 nt11.54□□□□□ -0.56
CHL1P22516 YMR090WYMR090W 684 nt11.52□□□□□ -0.57
CHL1P22516 PUS9YDL036C 1389 nt11.52□□□□□ -0.57
Retrieved 100 of 7,029 protein–RNA pairs in 46.1 ms