Protein–RNA interactions for Protein: P17536

TPM1, Tropomyosin-1, yeastyeast

Known RBP Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TPM1P17536 YLR281CYLR281C 468 nt14.3□□□□□ -0.12
TPM1P17536 WHI5YOR083W 888 nt14.29□□□□□ -0.12
TPM1P17536 YCH1YGR203W 447 nt14.27□□□□□ -0.13
TPM1P17536 YJL152WYJL152W 360 nt14.26□□□□□ -0.13
TPM1P17536 ART5YGR068C 1761 nt14.25□□□□□ -0.13
TPM1P17536 CAC2YML102W 1407 nt14.24□□□□□ -0.13
TPM1P17536 PET9YBL030C 957 nt14.23□□□□□ -0.13
TPM1P17536 YDL221WYDL221W 552 nt14.22□□□□□ -0.13
TPM1P17536 TIR4YOR009W 1464 nt14.2□□□□□ -0.14
TPM1P17536 GFD2YCL036W 1701 nt14.19□□□□□ -0.14
TPM1P17536 PUS2YGL063W 1113 nt14.16□□□□□ -0.14
TPM1P17536 tM(CAU)CtM(CAU)C 72 nt14.14□□□□□ -0.15
TPM1P17536 IMT4tM(CAU)E 72 nt14.14□□□□□ -0.15
TPM1P17536 IMT3tM(CAU)J3 72 nt14.14□□□□□ -0.15
TPM1P17536 IMT1tM(CAU)O1 72 nt14.14□□□□□ -0.15
TPM1P17536 IMT2tM(CAU)P 72 nt14.14□□□□□ -0.15
TPM1P17536 IMP2'YIL154C 1041 nt14.08□□□□□ -0.16
TPM1P17536 YMR057CYMR057C 372 nt14.07□□□□□ -0.16
TPM1P17536 IRC15YPL017C 1500 nt14.05□□□□□ -0.16
TPM1P17536 RTS2YOR077W 699 nt14.04□□□□□ -0.16
TPM1P17536 YBR220CYBR220C 1683 nt14.04□□□□□ -0.16
TPM1P17536 YCL048W-AYCL048W-A 240 nt14.03□□□□□ -0.16
TPM1P17536 SDH1YKL148C 1923 nt14.03□□□□□ -0.16
TPM1P17536 DSK2YMR276W 1122 nt14.02□□□□□ -0.17
TPM1P17536 IDH1YNL037C 1083 nt14.02□□□□□ -0.17
TPM1P17536 GIS3YLR094C 1509 nt13.97□□□□□ -0.17
TPM1P17536 SCC4YER147C 1875 nt13.97□□□□□ -0.17
TPM1P17536 BDF1YLR399C 2061 nt13.95□□□□□ -0.18
TPM1P17536 CUE1YMR264W 612 nt13.94□□□□□ -0.18
TPM1P17536 YLR236CYLR236C 324 nt13.87□□□□□ -0.19
TPM1P17536 YIL100WYIL100W 354 nt13.86□□□□□ -0.19
TPM1P17536 GBP2YCL011C 1284 nt13.86□□□□□ -0.19
TPM1P17536 FPS1YLL043W 2010 nt13.86□□□□□ -0.19
TPM1P17536 TAT1YBR069C 1860 nt13.8□□□□□ -0.2
TPM1P17536 FMP45YDL222C 930 nt13.8□□□□□ -0.2
TPM1P17536 YDR433WYDR433W 441 nt13.77□□□□□ -0.21
TPM1P17536 YPR011CYPR011C 981 nt13.75□□□□□ -0.21
TPM1P17536 TCD2YKL027W 1344 nt13.74□□□□□ -0.21
TPM1P17536 YNL195CYNL195C 786 nt13.72□□□□□ -0.21
TPM1P17536 ERV46YAL042W 1248 nt13.69□□□□□ -0.22
TPM1P17536 SEC11YIR022W 504 nt13.65□□□□□ -0.22
TPM1P17536 LPX1YOR084W 1164 nt13.64□□□□□ -0.23
TPM1P17536 YKR040CYKR040C 504 nt13.61□□□□□ -0.23
TPM1P17536 YSC84YHR016C 1407 nt13.6□□□□□ -0.23
TPM1P17536 RRD1YIL153W 1182 nt13.6□□□□□ -0.23
TPM1P17536 MXR2YCL033C 507 nt13.58□□□□□ -0.24
TPM1P17536 MOT3YMR070W 1473 nt13.57□□□□□ -0.24
TPM1P17536 FMP52YER004W 696 nt13.56□□□□□ -0.24
TPM1P17536 DED1YOR204W 1815 nt13.54□□□□□ -0.24
TPM1P17536 PCH2YBR186W 1695 nt13.53□□□□□ -0.24
TPM1P17536 RRT12YCR045C 1476 nt13.5□□□□□ -0.25
TPM1P17536 YCL042WYCL042W 360 nt13.49□□□□□ -0.25
TPM1P17536 YHL050CYHL050C 2094 nt13.48□□□□□ -0.25
TPM1P17536 GUT2YIL155C 1950 nt13.43□□□□□ -0.26
TPM1P17536 SOR2YDL246C 1074 nt13.41□□□□□ -0.26
TPM1P17536 SOR1YJR159W 1074 nt13.41□□□□□ -0.26
TPM1P17536 FMT1YBL013W 1206 nt13.4□□□□□ -0.26
TPM1P17536 CWP1YKL096W 720 nt13.39□□□□□ -0.27
TPM1P17536 FRD1YEL047C 1413 nt13.36□□□□□ -0.27
TPM1P17536 PCM1YEL058W 1674 nt13.35□□□□□ -0.27
TPM1P17536 SNF6YHL025W 999 nt13.34□□□□□ -0.27
TPM1P17536 ADH2YMR303C 1047 nt13.32□□□□□ -0.28
TPM1P17536 SPP1YPL138C 1062 nt13.28□□□□□ -0.28
TPM1P17536 Q0182Q0182 405 nt13.26□□□□□ -0.29
TPM1P17536 RTF1YGL244W 1677 nt13.24□□□□□ -0.29
TPM1P17536 YJL225CYJL225C 5277 nt13.23□□□□□ -0.29
TPM1P17536 BOP3YNL042W 1191 nt13.22□□□□□ -0.29
TPM1P17536 SIM1YIL123W 1431 nt13.21□□□□□ -0.3
TPM1P17536 YLR235CYLR235C 399 nt13.19□□□□□ -0.3
TPM1P17536 PIB2YGL023C 1908 nt13.15□□□□□ -0.3
TPM1P17536 PTH1YHR189W 573 nt13.14□□□□□ -0.31
TPM1P17536 LCB1YMR296C 1677 nt13.14□□□□□ -0.31
TPM1P17536 RNQ1YCL028W 1218 nt13.13□□□□□ -0.31
TPM1P17536 YIH1YCR059C 777 nt13.12□□□□□ -0.31
TPM1P17536 DIC1YLR348C 897 nt13.12□□□□□ -0.31
TPM1P17536 BIO4YNR057C 714 nt13.12□□□□□ -0.31
TPM1P17536 MRPL8YJL063C 717 nt13.07□□□□□ -0.32
TPM1P17536 NCP1YHR042W 2076 nt13.06□□□□□ -0.32
TPM1P17536 YKL030WYKL030W 606 nt13.05□□□□□ -0.32
TPM1P17536 YLL053CYLL053C 459 nt13.02□□□□□ -0.33
TPM1P17536 YEL076C-AYEL076C-A 651 nt13.01□□□□□ -0.33
TPM1P17536 YEL076CYEL076C 651 nt13.01□□□□□ -0.33
TPM1P17536 ADO1YJR105W 1023 nt13.01□□□□□ -0.33
TPM1P17536 YLR464WYLR464W 651 nt13.01□□□□□ -0.33
TPM1P17536 TIM23YNR017W 669 nt13.01□□□□□ -0.33
TPM1P17536 RTG1YOL067C 534 nt13.01□□□□□ -0.33
TPM1P17536 ERF2YLR246W 1080 nt13□□□□□ -0.33
TPM1P17536 YLR179CYLR179C 606 nt12.96□□□□□ -0.33
TPM1P17536 PTK1YKL198C 1989 nt12.96□□□□□ -0.34
TPM1P17536 HUA1YGR268C 597 nt12.95□□□□□ -0.34
TPM1P17536 FTR1YER145C 1215 nt12.94□□□□□ -0.34
TPM1P17536 AQY1YPR192W 918 nt12.93□□□□□ -0.34
TPM1P17536 YFL067WYFL067W 528 nt12.9□□□□□ -0.34
TPM1P17536 CRR1YLR213C 1269 nt12.89□□□□□ -0.35
TPM1P17536 GAL1YBR020W 1587 nt12.89□□□□□ -0.35
TPM1P17536 DDR2YOL052C-A 186 nt12.87□□□□□ -0.35
TPM1P17536 YPR064WYPR064W 420 nt12.87□□□□□ -0.35
TPM1P17536 TRM5YHR070W 1500 nt12.86□□□□□ -0.35
TPM1P17536 LYS4YDR234W 2082 nt12.84□□□□□ -0.35
TPM1P17536 RDN37-1RDN37-1 5354 nt12.83□□□□□ -0.36
Retrieved 100 of 7,029 protein–RNA pairs in 12.5 ms