Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.88■□□□□ 0.45
COL4A3BPQ9Y5P4 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.88■□□□□ 0.45
COL4A3BPQ9Y5P4 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.88■□□□□ 0.45
COL4A3BPQ9Y5P4 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.88■□□□□ 0.45
COL4A3BPQ9Y5P4 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.88■□□□□ 0.45
COL4A3BPQ9Y5P4 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.88■□□□□ 0.45
COL4A3BPQ9Y5P4 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL4A3BPQ9Y5P4 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL4A3BPQ9Y5P4 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL4A3BPQ9Y5P4 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.88■□□□□ 0.45
COL4A3BPQ9Y5P4 AL691432.1-201ENST00000596308 1422 ntBASIC17.88■□□□□ 0.45
COL4A3BPQ9Y5P4 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
COL4A3BPQ9Y5P4 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL4A3BPQ9Y5P4 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL4A3BPQ9Y5P4 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL4A3BPQ9Y5P4 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.87■□□□□ 0.45
COL4A3BPQ9Y5P4 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL4A3BPQ9Y5P4 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
COL4A3BPQ9Y5P4 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.87■□□□□ 0.45
COL4A3BPQ9Y5P4 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.87■□□□□ 0.45
COL4A3BPQ9Y5P4 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL4A3BPQ9Y5P4 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.87■□□□□ 0.45
COL4A3BPQ9Y5P4 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL4A3BPQ9Y5P4 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
COL4A3BPQ9Y5P4 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL4A3BPQ9Y5P4 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.87■□□□□ 0.45
COL4A3BPQ9Y5P4 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COL4A3BPQ9Y5P4 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL4A3BPQ9Y5P4 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
COL4A3BPQ9Y5P4 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.87■□□□□ 0.45
COL4A3BPQ9Y5P4 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COL4A3BPQ9Y5P4 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL4A3BPQ9Y5P4 AC236430.1-201ENST00000402231 743 ntBASIC17.87■□□□□ 0.45
COL4A3BPQ9Y5P4 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.87■□□□□ 0.45
COL4A3BPQ9Y5P4 AC002472.2-201ENST00000442739 958 ntBASIC17.87■□□□□ 0.45
COL4A3BPQ9Y5P4 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COL4A3BPQ9Y5P4 AL139010.1-201ENST00000454878 894 ntBASIC17.87■□□□□ 0.45
COL4A3BPQ9Y5P4 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.87■□□□□ 0.45
COL4A3BPQ9Y5P4 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.87■□□□□ 0.45
COL4A3BPQ9Y5P4 RN7SL204P-201ENST00000582831 262 ntBASIC17.87■□□□□ 0.45
COL4A3BPQ9Y5P4 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17.87■□□□□ 0.45
COL4A3BPQ9Y5P4 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.87■□□□□ 0.45
COL4A3BPQ9Y5P4 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL4A3BPQ9Y5P4 AC087499.5-201ENST00000452760 1342 ntBASIC17.87■□□□□ 0.45
COL4A3BPQ9Y5P4 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL4A3BPQ9Y5P4 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL4A3BPQ9Y5P4 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.87■□□□□ 0.45
COL4A3BPQ9Y5P4 AC022144.1-201ENST00000602255 1580 ntBASIC17.87■□□□□ 0.45
COL4A3BPQ9Y5P4 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL4A3BPQ9Y5P4 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL4A3BPQ9Y5P4 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
COL4A3BPQ9Y5P4 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL4A3BPQ9Y5P4 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL4A3BPQ9Y5P4 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
COL4A3BPQ9Y5P4 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.86■□□□□ 0.45
COL4A3BPQ9Y5P4 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL4A3BPQ9Y5P4 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.86■□□□□ 0.45
COL4A3BPQ9Y5P4 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL4A3BPQ9Y5P4 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL4A3BPQ9Y5P4 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
COL4A3BPQ9Y5P4 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.86■□□□□ 0.45
COL4A3BPQ9Y5P4 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
COL4A3BPQ9Y5P4 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL4A3BPQ9Y5P4 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
COL4A3BPQ9Y5P4 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.86■□□□□ 0.45
COL4A3BPQ9Y5P4 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.86■□□□□ 0.45
COL4A3BPQ9Y5P4 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
COL4A3BPQ9Y5P4 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
COL4A3BPQ9Y5P4 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL4A3BPQ9Y5P4 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.86■□□□□ 0.45
COL4A3BPQ9Y5P4 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17.86■□□□□ 0.45
COL4A3BPQ9Y5P4 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.86■□□□□ 0.45
COL4A3BPQ9Y5P4 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.86■□□□□ 0.45
COL4A3BPQ9Y5P4 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.86■□□□□ 0.45
COL4A3BPQ9Y5P4 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.86■□□□□ 0.45
COL4A3BPQ9Y5P4 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC17.86■□□□□ 0.45
COL4A3BPQ9Y5P4 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.86■□□□□ 0.45
COL4A3BPQ9Y5P4 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.86■□□□□ 0.45
COL4A3BPQ9Y5P4 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.86■□□□□ 0.45
COL4A3BPQ9Y5P4 AL844908.2-201ENST00000609461 460 ntBASIC17.86■□□□□ 0.45
COL4A3BPQ9Y5P4 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
COL4A3BPQ9Y5P4 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL4A3BPQ9Y5P4 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
COL4A3BPQ9Y5P4 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL4A3BPQ9Y5P4 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.86■□□□□ 0.45
COL4A3BPQ9Y5P4 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.86■□□□□ 0.45
COL4A3BPQ9Y5P4 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL4A3BPQ9Y5P4 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
COL4A3BPQ9Y5P4 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL4A3BPQ9Y5P4 AP005117.1-202ENST00000581724 1908 ntBASIC17.86■□□□□ 0.45
COL4A3BPQ9Y5P4 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.86■□□□□ 0.45
COL4A3BPQ9Y5P4 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
COL4A3BPQ9Y5P4 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.86■□□□□ 0.45
COL4A3BPQ9Y5P4 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL4A3BPQ9Y5P4 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
COL4A3BPQ9Y5P4 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL4A3BPQ9Y5P4 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL4A3BPQ9Y5P4 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL4A3BPQ9Y5P4 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
COL4A3BPQ9Y5P4 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms