Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.56■□□□□ 0.08
PCDHGA11Q9Y5H2 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.56■□□□□ 0.08
PCDHGA11Q9Y5H2 AC061975.2-201ENST00000581722 295 ntBASIC15.56■□□□□ 0.08
PCDHGA11Q9Y5H2 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.56■□□□□ 0.08
PCDHGA11Q9Y5H2 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.56■□□□□ 0.08
PCDHGA11Q9Y5H2 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.56■□□□□ 0.08
PCDHGA11Q9Y5H2 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.56■□□□□ 0.08
PCDHGA11Q9Y5H2 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.56■□□□□ 0.08
PCDHGA11Q9Y5H2 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
PCDHGA11Q9Y5H2 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
PCDHGA11Q9Y5H2 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.56■□□□□ 0.08
PCDHGA11Q9Y5H2 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.56■□□□□ 0.08
PCDHGA11Q9Y5H2 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA11Q9Y5H2 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDHGA11Q9Y5H2 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA11Q9Y5H2 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
PCDHGA11Q9Y5H2 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.56■□□□□ 0.08
PCDHGA11Q9Y5H2 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA11Q9Y5H2 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.56■□□□□ 0.08
PCDHGA11Q9Y5H2 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA11Q9Y5H2 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDHGA11Q9Y5H2 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA11Q9Y5H2 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDHGA11Q9Y5H2 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA11Q9Y5H2 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA11Q9Y5H2 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
PCDHGA11Q9Y5H2 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA11Q9Y5H2 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA11Q9Y5H2 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA11Q9Y5H2 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA11Q9Y5H2 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHGA11Q9Y5H2 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHGA11Q9Y5H2 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHGA11Q9Y5H2 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA11Q9Y5H2 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
PCDHGA11Q9Y5H2 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA11Q9Y5H2 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
PCDHGA11Q9Y5H2 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA11Q9Y5H2 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA11Q9Y5H2 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.55■□□□□ 0.08
PCDHGA11Q9Y5H2 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA11Q9Y5H2 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.55■□□□□ 0.08
PCDHGA11Q9Y5H2 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHGA11Q9Y5H2 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA11Q9Y5H2 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA11Q9Y5H2 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHGA11Q9Y5H2 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA11Q9Y5H2 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC15.55■□□□□ 0.08
PCDHGA11Q9Y5H2 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHGA11Q9Y5H2 TIMM8BP1-201ENST00000452384 211 ntBASIC15.55■□□□□ 0.08
PCDHGA11Q9Y5H2 LINC01225-203ENST00000563550 1244 ntBASIC15.55■□□□□ 0.08
PCDHGA11Q9Y5H2 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.55■□□□□ 0.08
PCDHGA11Q9Y5H2 AP000842.3-202ENST00000569238 1080 ntBASIC15.55■□□□□ 0.08
PCDHGA11Q9Y5H2 AC005829.1-201ENST00000570002 483 ntBASIC15.55■□□□□ 0.08
PCDHGA11Q9Y5H2 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.55■□□□□ 0.08
PCDHGA11Q9Y5H2 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.55■□□□□ 0.08
PCDHGA11Q9Y5H2 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.55■□□□□ 0.08
PCDHGA11Q9Y5H2 AL671883.3-201ENST00000603274 991 ntBASIC15.55■□□□□ 0.08
PCDHGA11Q9Y5H2 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.55■□□□□ 0.08
PCDHGA11Q9Y5H2 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA11Q9Y5H2 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA11Q9Y5H2 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
PCDHGA11Q9Y5H2 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA11Q9Y5H2 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA11Q9Y5H2 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA11Q9Y5H2 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA11Q9Y5H2 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
PCDHGA11Q9Y5H2 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
PCDHGA11Q9Y5H2 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
PCDHGA11Q9Y5H2 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.55■□□□□ 0.08
PCDHGA11Q9Y5H2 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.55■□□□□ 0.08
PCDHGA11Q9Y5H2 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA11Q9Y5H2 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA11Q9Y5H2 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.55■□□□□ 0.08
PCDHGA11Q9Y5H2 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA11Q9Y5H2 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA11Q9Y5H2 ELL2P1-201ENST00000413990 1906 ntBASIC15.55■□□□□ 0.08
PCDHGA11Q9Y5H2 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
PCDHGA11Q9Y5H2 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.54■□□□□ 0.08
PCDHGA11Q9Y5H2 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
PCDHGA11Q9Y5H2 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA11Q9Y5H2 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA11Q9Y5H2 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA11Q9Y5H2 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.54■□□□□ 0.08
PCDHGA11Q9Y5H2 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA11Q9Y5H2 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA11Q9Y5H2 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA11Q9Y5H2 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA11Q9Y5H2 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.54■□□□□ 0.08
PCDHGA11Q9Y5H2 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
PCDHGA11Q9Y5H2 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
PCDHGA11Q9Y5H2 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA11Q9Y5H2 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA11Q9Y5H2 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA11Q9Y5H2 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA11Q9Y5H2 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA11Q9Y5H2 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.54■□□□□ 0.08
PCDHGA11Q9Y5H2 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA11Q9Y5H2 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.54■□□□□ 0.08
PCDHGA11Q9Y5H2 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms