Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 AC011477.6-201ENST00000604980 1927 ntBASIC16.57■□□□□ 0.24
YIPF1Q9Y548 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
YIPF1Q9Y548 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
YIPF1Q9Y548 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
YIPF1Q9Y548 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
YIPF1Q9Y548 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.57■□□□□ 0.24
YIPF1Q9Y548 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.57■□□□□ 0.24
YIPF1Q9Y548 AL121723.1-201ENST00000445194 1519 ntBASIC16.57■□□□□ 0.24
YIPF1Q9Y548 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
YIPF1Q9Y548 AC018665.1-201ENST00000622927 1362 ntBASIC16.57■□□□□ 0.24
YIPF1Q9Y548 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
YIPF1Q9Y548 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
YIPF1Q9Y548 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
YIPF1Q9Y548 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
YIPF1Q9Y548 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.57■□□□□ 0.24
YIPF1Q9Y548 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
YIPF1Q9Y548 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
YIPF1Q9Y548 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.57■□□□□ 0.24
YIPF1Q9Y548 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC16.57■□□□□ 0.24
YIPF1Q9Y548 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
YIPF1Q9Y548 AC119751.2-201ENST00000504529 210 ntBASIC16.57■□□□□ 0.24
YIPF1Q9Y548 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.57■□□□□ 0.24
YIPF1Q9Y548 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.57■□□□□ 0.24
YIPF1Q9Y548 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.57■□□□□ 0.24
YIPF1Q9Y548 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC16.57■□□□□ 0.24
YIPF1Q9Y548 AC120045.2-201ENST00000567334 178 ntBASIC16.57■□□□□ 0.24
YIPF1Q9Y548 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.57■□□□□ 0.24
YIPF1Q9Y548 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.57■□□□□ 0.24
YIPF1Q9Y548 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.57■□□□□ 0.24
YIPF1Q9Y548 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.57■□□□□ 0.24
YIPF1Q9Y548 AC233724.13-201ENST00000598383 410 ntBASIC16.57■□□□□ 0.24
YIPF1Q9Y548 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.57■□□□□ 0.24
YIPF1Q9Y548 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.57■□□□□ 0.24
YIPF1Q9Y548 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
YIPF1Q9Y548 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
YIPF1Q9Y548 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
YIPF1Q9Y548 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.57■□□□□ 0.24
YIPF1Q9Y548 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
YIPF1Q9Y548 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.57■□□□□ 0.24
YIPF1Q9Y548 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
YIPF1Q9Y548 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.57■□□□□ 0.24
YIPF1Q9Y548 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
YIPF1Q9Y548 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
YIPF1Q9Y548 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
YIPF1Q9Y548 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.56■□□□□ 0.24
YIPF1Q9Y548 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.56■□□□□ 0.24
YIPF1Q9Y548 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
YIPF1Q9Y548 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
YIPF1Q9Y548 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
YIPF1Q9Y548 PCDHA14-201ENST00000506751 2298 ntBASIC16.56■□□□□ 0.24
YIPF1Q9Y548 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.56■□□□□ 0.24
YIPF1Q9Y548 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
YIPF1Q9Y548 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
YIPF1Q9Y548 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
YIPF1Q9Y548 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
YIPF1Q9Y548 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
YIPF1Q9Y548 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
YIPF1Q9Y548 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.56■□□□□ 0.24
YIPF1Q9Y548 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC16.56■□□□□ 0.24
YIPF1Q9Y548 SOCS2P1-201ENST00000417727 557 ntBASIC16.56■□□□□ 0.24
YIPF1Q9Y548 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.56■□□□□ 0.24
YIPF1Q9Y548 KRT43P-201ENST00000434019 910 ntBASIC16.56■□□□□ 0.24
YIPF1Q9Y548 RPS2P32-201ENST00000439199 892 ntBASIC16.56■□□□□ 0.24
YIPF1Q9Y548 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
YIPF1Q9Y548 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.56■□□□□ 0.24
YIPF1Q9Y548 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.56■□□□□ 0.24
YIPF1Q9Y548 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC16.56■□□□□ 0.24
YIPF1Q9Y548 TDH-203ENST00000531764 1110 ntBASIC16.56■□□□□ 0.24
YIPF1Q9Y548 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.56■□□□□ 0.24
YIPF1Q9Y548 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
YIPF1Q9Y548 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.56■□□□□ 0.24
YIPF1Q9Y548 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.56■□□□□ 0.24
YIPF1Q9Y548 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.56■□□□□ 0.24
YIPF1Q9Y548 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.56■□□□□ 0.24
YIPF1Q9Y548 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.56■□□□□ 0.24
YIPF1Q9Y548 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.56■□□□□ 0.24
YIPF1Q9Y548 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.56■□□□□ 0.24
YIPF1Q9Y548 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
YIPF1Q9Y548 AC000095.1-201ENST00000603208 874 ntBASIC16.56■□□□□ 0.24
YIPF1Q9Y548 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
YIPF1Q9Y548 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
YIPF1Q9Y548 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.56■□□□□ 0.24
YIPF1Q9Y548 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.56■□□□□ 0.24
YIPF1Q9Y548 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
YIPF1Q9Y548 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
YIPF1Q9Y548 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
YIPF1Q9Y548 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
YIPF1Q9Y548 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
YIPF1Q9Y548 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
YIPF1Q9Y548 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
YIPF1Q9Y548 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
YIPF1Q9Y548 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.55■□□□□ 0.24
YIPF1Q9Y548 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
YIPF1Q9Y548 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
YIPF1Q9Y548 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
YIPF1Q9Y548 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.55■□□□□ 0.24
YIPF1Q9Y548 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.55■□□□□ 0.24
YIPF1Q9Y548 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
YIPF1Q9Y548 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
YIPF1Q9Y548 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms