Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DENND2AQ9ULE3 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DENND2AQ9ULE3 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
DENND2AQ9ULE3 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DENND2AQ9ULE3 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
DENND2AQ9ULE3 NSL1-201ENST00000366976 722 ntTSL 2 BASIC19.26■□□□□ 0.67
DENND2AQ9ULE3 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DENND2AQ9ULE3 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC19.26■□□□□ 0.67
DENND2AQ9ULE3 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DENND2AQ9ULE3 GIMAP3P-201ENST00000495150 836 ntBASIC19.26■□□□□ 0.67
DENND2AQ9ULE3 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DENND2AQ9ULE3 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC19.26■□□□□ 0.67
DENND2AQ9ULE3 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC19.26■□□□□ 0.67
DENND2AQ9ULE3 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC19.26■□□□□ 0.67
DENND2AQ9ULE3 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC19.26■□□□□ 0.67
DENND2AQ9ULE3 AC036164.1-201ENST00000570544 333 ntBASIC19.26■□□□□ 0.67
DENND2AQ9ULE3 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC19.26■□□□□ 0.67
DENND2AQ9ULE3 AC097359.3-201ENST00000603982 1210 ntBASIC19.26■□□□□ 0.67
DENND2AQ9ULE3 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
DENND2AQ9ULE3 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
DENND2AQ9ULE3 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DENND2AQ9ULE3 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
DENND2AQ9ULE3 CLK3P2-201ENST00000427566 1453 ntBASIC19.26■□□□□ 0.67
DENND2AQ9ULE3 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
DENND2AQ9ULE3 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DENND2AQ9ULE3 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DENND2AQ9ULE3 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DENND2AQ9ULE3 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DENND2AQ9ULE3 GCK-209ENST00000616242 2260 ntTSL 5 BASIC19.26■□□□□ 0.67
DENND2AQ9ULE3 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DENND2AQ9ULE3 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
DENND2AQ9ULE3 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
DENND2AQ9ULE3 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC19.26■□□□□ 0.67
DENND2AQ9ULE3 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
DENND2AQ9ULE3 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
DENND2AQ9ULE3 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC19.25■□□□□ 0.67
DENND2AQ9ULE3 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
DENND2AQ9ULE3 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC19.25■□□□□ 0.67
DENND2AQ9ULE3 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
DENND2AQ9ULE3 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DENND2AQ9ULE3 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
DENND2AQ9ULE3 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DENND2AQ9ULE3 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DENND2AQ9ULE3 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DENND2AQ9ULE3 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC19.25■□□□□ 0.67
DENND2AQ9ULE3 MTHFR-217ENST00000641820 1569 ntBASIC19.25■□□□□ 0.67
DENND2AQ9ULE3 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC19.25■□□□□ 0.67
DENND2AQ9ULE3 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC19.25■□□□□ 0.67
DENND2AQ9ULE3 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
DENND2AQ9ULE3 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DENND2AQ9ULE3 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
DENND2AQ9ULE3 PKIG-203ENST00000372887 769 ntTSL 3 BASIC19.25■□□□□ 0.67
DENND2AQ9ULE3 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
DENND2AQ9ULE3 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC19.25■□□□□ 0.67
DENND2AQ9ULE3 SLED1-202ENST00000512051 380 ntBASIC19.25■□□□□ 0.67
DENND2AQ9ULE3 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
DENND2AQ9ULE3 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC19.25■□□□□ 0.67
DENND2AQ9ULE3 AC132938.2-201ENST00000579188 680 ntBASIC19.25■□□□□ 0.67
DENND2AQ9ULE3 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC19.25■□□□□ 0.67
DENND2AQ9ULE3 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC19.25■□□□□ 0.67
DENND2AQ9ULE3 AL591163.1-201ENST00000641757 987 ntBASIC19.25■□□□□ 0.67
DENND2AQ9ULE3 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC19.25■□□□□ 0.67
DENND2AQ9ULE3 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
DENND2AQ9ULE3 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC19.25■□□□□ 0.67
DENND2AQ9ULE3 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DENND2AQ9ULE3 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DENND2AQ9ULE3 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
DENND2AQ9ULE3 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DENND2AQ9ULE3 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
DENND2AQ9ULE3 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DENND2AQ9ULE3 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
DENND2AQ9ULE3 AL596087.1-201ENST00000400979 1969 ntBASIC19.24■□□□□ 0.67
DENND2AQ9ULE3 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
DENND2AQ9ULE3 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
DENND2AQ9ULE3 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DENND2AQ9ULE3 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DENND2AQ9ULE3 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
DENND2AQ9ULE3 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DENND2AQ9ULE3 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
DENND2AQ9ULE3 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
DENND2AQ9ULE3 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
DENND2AQ9ULE3 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DENND2AQ9ULE3 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC19.24■□□□□ 0.67
DENND2AQ9ULE3 KRT18P64-201ENST00000434946 1219 ntBASIC19.24■□□□□ 0.67
DENND2AQ9ULE3 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC19.24■□□□□ 0.67
DENND2AQ9ULE3 AC092552.1-201ENST00000547243 906 ntBASIC19.24■□□□□ 0.67
DENND2AQ9ULE3 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC19.24■□□□□ 0.67
DENND2AQ9ULE3 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
DENND2AQ9ULE3 WFDC1-204ENST00000613603 549 ntBASIC19.24■□□□□ 0.67
DENND2AQ9ULE3 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC19.24■□□□□ 0.67
DENND2AQ9ULE3 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
DENND2AQ9ULE3 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
DENND2AQ9ULE3 CDC14C-201ENST00000428251 1719 ntBASIC19.24■□□□□ 0.67
DENND2AQ9ULE3 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
DENND2AQ9ULE3 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
DENND2AQ9ULE3 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC19.24■□□□□ 0.67
DENND2AQ9ULE3 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DENND2AQ9ULE3 AC011477.6-201ENST00000604980 1927 ntBASIC19.23■□□□□ 0.67
DENND2AQ9ULE3 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC19.23■□□□□ 0.67
DENND2AQ9ULE3 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms