Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HDAC6Q9UBN7 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.08■□□□□ 0.49
HDAC6Q9UBN7 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC18.08■□□□□ 0.49
HDAC6Q9UBN7 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HDAC6Q9UBN7 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
HDAC6Q9UBN7 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HDAC6Q9UBN7 KRT8P12-202ENST00000472924 1397 ntBASIC18.08■□□□□ 0.49
HDAC6Q9UBN7 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HDAC6Q9UBN7 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HDAC6Q9UBN7 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC18.08■□□□□ 0.48
HDAC6Q9UBN7 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
HDAC6Q9UBN7 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC18.08■□□□□ 0.48
HDAC6Q9UBN7 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
HDAC6Q9UBN7 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.08■□□□□ 0.48
HDAC6Q9UBN7 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC18.08■□□□□ 0.48
HDAC6Q9UBN7 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.08■□□□□ 0.48
HDAC6Q9UBN7 TEX48-202ENST00000612244 662 ntTSL 3 BASIC18.08■□□□□ 0.48
HDAC6Q9UBN7 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC18.08■□□□□ 0.48
HDAC6Q9UBN7 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HDAC6Q9UBN7 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HDAC6Q9UBN7 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HDAC6Q9UBN7 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HDAC6Q9UBN7 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
HDAC6Q9UBN7 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HDAC6Q9UBN7 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HDAC6Q9UBN7 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HDAC6Q9UBN7 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
HDAC6Q9UBN7 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
HDAC6Q9UBN7 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
HDAC6Q9UBN7 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
HDAC6Q9UBN7 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.08■□□□□ 0.48
HDAC6Q9UBN7 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC18.08■□□□□ 0.48
HDAC6Q9UBN7 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18.08■□□□□ 0.48
HDAC6Q9UBN7 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18.08■□□□□ 0.48
HDAC6Q9UBN7 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HDAC6Q9UBN7 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC18.07■□□□□ 0.48
HDAC6Q9UBN7 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
HDAC6Q9UBN7 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC18.07■□□□□ 0.48
HDAC6Q9UBN7 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC18.07■□□□□ 0.48
HDAC6Q9UBN7 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HDAC6Q9UBN7 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.07■□□□□ 0.48
HDAC6Q9UBN7 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HDAC6Q9UBN7 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
HDAC6Q9UBN7 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.07■□□□□ 0.48
HDAC6Q9UBN7 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HDAC6Q9UBN7 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
HDAC6Q9UBN7 SPDYE17-201ENST00000412399 783 ntBASIC18.07■□□□□ 0.48
HDAC6Q9UBN7 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HDAC6Q9UBN7 U91328.1-201ENST00000437528 223 ntBASIC18.07■□□□□ 0.48
HDAC6Q9UBN7 AC007274.1-201ENST00000439805 662 ntBASIC18.07■□□□□ 0.48
HDAC6Q9UBN7 SERBP1P3-201ENST00000459980 809 ntBASIC18.07■□□□□ 0.48
HDAC6Q9UBN7 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.07■□□□□ 0.48
HDAC6Q9UBN7 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HDAC6Q9UBN7 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
HDAC6Q9UBN7 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC18.07■□□□□ 0.48
HDAC6Q9UBN7 AL033527.5-202ENST00000641632 1098 ntBASIC18.07■□□□□ 0.48
HDAC6Q9UBN7 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
HDAC6Q9UBN7 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
HDAC6Q9UBN7 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HDAC6Q9UBN7 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HDAC6Q9UBN7 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC18.07■□□□□ 0.48
HDAC6Q9UBN7 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC18.07■□□□□ 0.48
HDAC6Q9UBN7 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.07■□□□□ 0.48
HDAC6Q9UBN7 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HDAC6Q9UBN7 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HDAC6Q9UBN7 AC068418.2-201ENST00000577309 3703 ntBASIC18.07■□□□□ 0.48
HDAC6Q9UBN7 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC18.07■□□□□ 0.48
HDAC6Q9UBN7 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC18.07■□□□□ 0.48
HDAC6Q9UBN7 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HDAC6Q9UBN7 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HDAC6Q9UBN7 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
HDAC6Q9UBN7 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
HDAC6Q9UBN7 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.06■□□□□ 0.48
HDAC6Q9UBN7 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HDAC6Q9UBN7 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HDAC6Q9UBN7 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HDAC6Q9UBN7 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC18.06■□□□□ 0.48
HDAC6Q9UBN7 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HDAC6Q9UBN7 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HDAC6Q9UBN7 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HDAC6Q9UBN7 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
HDAC6Q9UBN7 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HDAC6Q9UBN7 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HDAC6Q9UBN7 AC098614.1-201ENST00000368528 745 ntBASIC18.06■□□□□ 0.48
HDAC6Q9UBN7 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.06■□□□□ 0.48
HDAC6Q9UBN7 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
HDAC6Q9UBN7 AC114501.2-201ENST00000439631 535 ntBASIC18.06■□□□□ 0.48
HDAC6Q9UBN7 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HDAC6Q9UBN7 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.06■□□□□ 0.48
HDAC6Q9UBN7 AC026979.3-201ENST00000607315 403 ntBASIC18.06■□□□□ 0.48
HDAC6Q9UBN7 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HDAC6Q9UBN7 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HDAC6Q9UBN7 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.06■□□□□ 0.48
HDAC6Q9UBN7 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.06■□□□□ 0.48
HDAC6Q9UBN7 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
HDAC6Q9UBN7 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
HDAC6Q9UBN7 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC18.06■□□□□ 0.48
HDAC6Q9UBN7 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.06■□□□□ 0.48
HDAC6Q9UBN7 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
HDAC6Q9UBN7 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms