Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 GNRHR2-203ENST00000581100 1187 ntBASIC17.4■□□□□ 0.38
TRMT13Q9NUP7 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRMT13Q9NUP7 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRMT13Q9NUP7 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRMT13Q9NUP7 AL121723.1-201ENST00000445194 1519 ntBASIC17.4■□□□□ 0.38
TRMT13Q9NUP7 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRMT13Q9NUP7 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
TRMT13Q9NUP7 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRMT13Q9NUP7 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRMT13Q9NUP7 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRMT13Q9NUP7 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRMT13Q9NUP7 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRMT13Q9NUP7 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC17.39■□□□□ 0.38
TRMT13Q9NUP7 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.38
TRMT13Q9NUP7 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRMT13Q9NUP7 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRMT13Q9NUP7 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRMT13Q9NUP7 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRMT13Q9NUP7 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRMT13Q9NUP7 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRMT13Q9NUP7 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRMT13Q9NUP7 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
TRMT13Q9NUP7 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.39■□□□□ 0.37
TRMT13Q9NUP7 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRMT13Q9NUP7 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC17.39■□□□□ 0.37
TRMT13Q9NUP7 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC17.39■□□□□ 0.37
TRMT13Q9NUP7 RPL8-205ENST00000527914 551 ntTSL 3 BASIC17.39■□□□□ 0.37
TRMT13Q9NUP7 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC17.39■□□□□ 0.37
TRMT13Q9NUP7 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRMT13Q9NUP7 AC079316.1-201ENST00000548397 411 ntBASIC17.39■□□□□ 0.37
TRMT13Q9NUP7 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRMT13Q9NUP7 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC17.39■□□□□ 0.37
TRMT13Q9NUP7 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC17.39■□□□□ 0.37
TRMT13Q9NUP7 IGHV3OR16-16-201ENST00000563644 343 ntBASIC17.39■□□□□ 0.37
TRMT13Q9NUP7 RN7SL560P-201ENST00000577943 264 ntBASIC17.39■□□□□ 0.37
TRMT13Q9NUP7 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17.39■□□□□ 0.37
TRMT13Q9NUP7 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC17.39■□□□□ 0.37
TRMT13Q9NUP7 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC17.39■□□□□ 0.37
TRMT13Q9NUP7 RHOXF1P1-202ENST00000635473 501 ntBASIC17.39■□□□□ 0.37
TRMT13Q9NUP7 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRMT13Q9NUP7 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRMT13Q9NUP7 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.39■□□□□ 0.37
TRMT13Q9NUP7 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRMT13Q9NUP7 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRMT13Q9NUP7 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC17.39■□□□□ 0.37
TRMT13Q9NUP7 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
TRMT13Q9NUP7 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRMT13Q9NUP7 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.39■□□□□ 0.37
TRMT13Q9NUP7 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRMT13Q9NUP7 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRMT13Q9NUP7 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRMT13Q9NUP7 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
TRMT13Q9NUP7 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRMT13Q9NUP7 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRMT13Q9NUP7 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRMT13Q9NUP7 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC17.38■□□□□ 0.37
TRMT13Q9NUP7 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRMT13Q9NUP7 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.38■□□□□ 0.37
TRMT13Q9NUP7 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.38■□□□□ 0.37
TRMT13Q9NUP7 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.38■□□□□ 0.37
TRMT13Q9NUP7 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TRMT13Q9NUP7 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRMT13Q9NUP7 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.38■□□□□ 0.37
TRMT13Q9NUP7 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRMT13Q9NUP7 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRMT13Q9NUP7 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRMT13Q9NUP7 MIR1247-201ENST00000408206 136 ntBASIC17.38■□□□□ 0.37
TRMT13Q9NUP7 OLR1-203ENST00000432556 950 ntTSL 2 BASIC17.38■□□□□ 0.37
TRMT13Q9NUP7 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TRMT13Q9NUP7 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.38■□□□□ 0.37
TRMT13Q9NUP7 TPI1-206ENST00000488464 791 ntTSL 5 BASIC17.38■□□□□ 0.37
TRMT13Q9NUP7 AC000095.1-201ENST00000603208 874 ntBASIC17.38■□□□□ 0.37
TRMT13Q9NUP7 AC097359.3-201ENST00000603982 1210 ntBASIC17.38■□□□□ 0.37
TRMT13Q9NUP7 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC17.38■□□□□ 0.37
TRMT13Q9NUP7 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.38■□□□□ 0.37
TRMT13Q9NUP7 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC17.38■□□□□ 0.37
TRMT13Q9NUP7 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRMT13Q9NUP7 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRMT13Q9NUP7 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRMT13Q9NUP7 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.38■□□□□ 0.37
TRMT13Q9NUP7 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
TRMT13Q9NUP7 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TRMT13Q9NUP7 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC17.38■□□□□ 0.37
TRMT13Q9NUP7 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.38■□□□□ 0.37
TRMT13Q9NUP7 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRMT13Q9NUP7 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TRMT13Q9NUP7 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRMT13Q9NUP7 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
TRMT13Q9NUP7 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRMT13Q9NUP7 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRMT13Q9NUP7 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TRMT13Q9NUP7 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRMT13Q9NUP7 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRMT13Q9NUP7 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.37■□□□□ 0.37
TRMT13Q9NUP7 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRMT13Q9NUP7 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.37■□□□□ 0.37
TRMT13Q9NUP7 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRMT13Q9NUP7 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRMT13Q9NUP7 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRMT13Q9NUP7 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms