Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDH20Q9HBT6 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDH20Q9HBT6 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDH20Q9HBT6 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDH20Q9HBT6 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDH20Q9HBT6 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CDH20Q9HBT6 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.05□□□□□ -0.16
CDH20Q9HBT6 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.05□□□□□ -0.16
CDH20Q9HBT6 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDH20Q9HBT6 AL161772.1-201ENST00000610494 4412 ntBASIC14.05□□□□□ -0.16
CDH20Q9HBT6 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDH20Q9HBT6 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDH20Q9HBT6 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDH20Q9HBT6 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.05□□□□□ -0.16
CDH20Q9HBT6 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
CDH20Q9HBT6 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.05□□□□□ -0.16
CDH20Q9HBT6 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
CDH20Q9HBT6 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDH20Q9HBT6 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CDH20Q9HBT6 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.04□□□□□ -0.16
CDH20Q9HBT6 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDH20Q9HBT6 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.04□□□□□ -0.16
CDH20Q9HBT6 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDH20Q9HBT6 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.04□□□□□ -0.16
CDH20Q9HBT6 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDH20Q9HBT6 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDH20Q9HBT6 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDH20Q9HBT6 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.04□□□□□ -0.16
CDH20Q9HBT6 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDH20Q9HBT6 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.04□□□□□ -0.16
CDH20Q9HBT6 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDH20Q9HBT6 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDH20Q9HBT6 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CDH20Q9HBT6 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CDH20Q9HBT6 AL139400.1-201ENST00000366220 510 ntBASIC14.04□□□□□ -0.16
CDH20Q9HBT6 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDH20Q9HBT6 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CDH20Q9HBT6 FAM86GP-201ENST00000448322 971 ntBASIC14.04□□□□□ -0.16
CDH20Q9HBT6 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.04□□□□□ -0.16
CDH20Q9HBT6 AC069262.1-201ENST00000539058 672 ntBASIC14.04□□□□□ -0.16
CDH20Q9HBT6 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.04□□□□□ -0.16
CDH20Q9HBT6 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CDH20Q9HBT6 AC093028.1-201ENST00000622998 982 ntBASIC14.04□□□□□ -0.16
CDH20Q9HBT6 Z92544.3-201ENST00000624747 417 ntBASIC14.04□□□□□ -0.16
CDH20Q9HBT6 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.04□□□□□ -0.16
CDH20Q9HBT6 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDH20Q9HBT6 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDH20Q9HBT6 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDH20Q9HBT6 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDH20Q9HBT6 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CDH20Q9HBT6 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDH20Q9HBT6 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDH20Q9HBT6 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.04□□□□□ -0.16
CDH20Q9HBT6 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDH20Q9HBT6 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDH20Q9HBT6 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDH20Q9HBT6 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDH20Q9HBT6 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDH20Q9HBT6 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDH20Q9HBT6 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDH20Q9HBT6 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.03□□□□□ -0.16
CDH20Q9HBT6 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
CDH20Q9HBT6 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.03□□□□□ -0.16
CDH20Q9HBT6 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.03□□□□□ -0.16
CDH20Q9HBT6 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CDH20Q9HBT6 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDH20Q9HBT6 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDH20Q9HBT6 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDH20Q9HBT6 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDH20Q9HBT6 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDH20Q9HBT6 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDH20Q9HBT6 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.03□□□□□ -0.16
CDH20Q9HBT6 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDH20Q9HBT6 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.03□□□□□ -0.16
CDH20Q9HBT6 AL139010.1-201ENST00000454878 894 ntBASIC14.03□□□□□ -0.16
CDH20Q9HBT6 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDH20Q9HBT6 AC067863.1-201ENST00000494933 530 ntBASIC14.03□□□□□ -0.16
CDH20Q9HBT6 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.03□□□□□ -0.16
CDH20Q9HBT6 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDH20Q9HBT6 AL512356.2-201ENST00000546955 174 ntBASIC14.03□□□□□ -0.16
CDH20Q9HBT6 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.03□□□□□ -0.16
CDH20Q9HBT6 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.03□□□□□ -0.16
CDH20Q9HBT6 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.03□□□□□ -0.16
CDH20Q9HBT6 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.03□□□□□ -0.16
CDH20Q9HBT6 MIR4453-201ENST00000584019 89 ntBASIC14.03□□□□□ -0.16
CDH20Q9HBT6 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
CDH20Q9HBT6 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDH20Q9HBT6 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.03□□□□□ -0.16
CDH20Q9HBT6 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDH20Q9HBT6 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.03□□□□□ -0.16
CDH20Q9HBT6 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDH20Q9HBT6 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDH20Q9HBT6 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDH20Q9HBT6 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.03□□□□□ -0.16
CDH20Q9HBT6 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDH20Q9HBT6 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.03□□□□□ -0.16
CDH20Q9HBT6 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDH20Q9HBT6 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.03□□□□□ -0.16
CDH20Q9HBT6 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.03□□□□□ -0.16
CDH20Q9HBT6 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms