Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
KRTAP3-3Q9BYR6 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
KRTAP3-3Q9BYR6 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
KRTAP3-3Q9BYR6 AL512408.1-201ENST00000569378 2000 ntBASIC10.21□□□□□ -0.77
KRTAP3-3Q9BYR6 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
KRTAP3-3Q9BYR6 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC10.21□□□□□ -0.77
KRTAP3-3Q9BYR6 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC10.21□□□□□ -0.77
KRTAP3-3Q9BYR6 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
KRTAP3-3Q9BYR6 SYF2-202ENST00000354361 926 ntTSL 2 BASIC10.21□□□□□ -0.77
KRTAP3-3Q9BYR6 Y_RNA.145-201ENST00000363527 102 ntBASIC10.21□□□□□ -0.77
KRTAP3-3Q9BYR6 Y_RNA.422-201ENST00000384054 114 ntBASIC10.21□□□□□ -0.77
KRTAP3-3Q9BYR6 Y_RNA.453-201ENST00000384223 109 ntBASIC10.21□□□□□ -0.77
KRTAP3-3Q9BYR6 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
KRTAP3-3Q9BYR6 MIR1284-201ENST00000408337 120 ntBASIC10.21□□□□□ -0.77
KRTAP3-3Q9BYR6 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC10.21□□□□□ -0.77
KRTAP3-3Q9BYR6 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
KRTAP3-3Q9BYR6 LINP1-201ENST00000417112 917 ntTSL 2 BASIC10.21□□□□□ -0.77
KRTAP3-3Q9BYR6 COL4A2-AS1-201ENST00000417970 540 ntTSL 3 BASIC10.21□□□□□ -0.77
KRTAP3-3Q9BYR6 RPL7P53-201ENST00000421245 739 ntBASIC10.21□□□□□ -0.77
KRTAP3-3Q9BYR6 AC116609.1-201ENST00000425850 535 ntTSL 4 BASIC10.21□□□□□ -0.77
KRTAP3-3Q9BYR6 AC109779.1-202ENST00000439810 579 ntTSL 4 BASIC10.21□□□□□ -0.77
KRTAP3-3Q9BYR6 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC10.21□□□□□ -0.77
KRTAP3-3Q9BYR6 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC10.21□□□□□ -0.77
KRTAP3-3Q9BYR6 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC10.21□□□□□ -0.77
KRTAP3-3Q9BYR6 LINC00408-201ENST00000447784 560 ntTSL 5 BASIC10.21□□□□□ -0.77
KRTAP3-3Q9BYR6 OTX2P1-201ENST00000450956 354 ntBASIC10.21□□□□□ -0.77
KRTAP3-3Q9BYR6 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC10.21□□□□□ -0.77
KRTAP3-3Q9BYR6 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC10.21□□□□□ -0.77
KRTAP3-3Q9BYR6 TAF8-207ENST00000482432 556 ntTSL 2 BASIC10.21□□□□□ -0.77
KRTAP3-3Q9BYR6 AF250324.1-204ENST00000501825 841 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
KRTAP3-3Q9BYR6 AC114981.1-201ENST00000503897 678 ntBASIC10.21□□□□□ -0.77
KRTAP3-3Q9BYR6 AC021087.2-201ENST00000504656 1203 ntBASIC10.21□□□□□ -0.77
KRTAP3-3Q9BYR6 AC104090.1-201ENST00000506341 1171 ntBASIC10.21□□□□□ -0.77
KRTAP3-3Q9BYR6 RNU6-358P-201ENST00000516564 75 ntBASIC10.21□□□□□ -0.77
KRTAP3-3Q9BYR6 CASP3-205ENST00000517513 964 ntTSL 5 BASIC10.21□□□□□ -0.77
KRTAP3-3Q9BYR6 LINC01288-201ENST00000519189 529 ntTSL 4 BASIC10.21□□□□□ -0.77
KRTAP3-3Q9BYR6 CRYAB-203ENST00000525823 915 ntTSL 2 BASIC10.21□□□□□ -0.77
KRTAP3-3Q9BYR6 CRYAB-212ENST00000533280 545 ntTSL 2 BASIC10.21□□□□□ -0.77
KRTAP3-3Q9BYR6 DUX4L19-201ENST00000557448 1267 ntBASIC10.21□□□□□ -0.77
KRTAP3-3Q9BYR6 AC087481.1-201ENST00000561684 965 ntBASIC10.21□□□□□ -0.77
KRTAP3-3Q9BYR6 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC10.21□□□□□ -0.77
KRTAP3-3Q9BYR6 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC10.21□□□□□ -0.77
KRTAP3-3Q9BYR6 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC10.21□□□□□ -0.77
KRTAP3-3Q9BYR6 AP000860.1-201ENST00000605250 559 ntBASIC10.21□□□□□ -0.77
KRTAP3-3Q9BYR6 AC008443.7-201ENST00000622195 246 ntBASIC10.21□□□□□ -0.77
KRTAP3-3Q9BYR6 AC138951.2-201ENST00000623455 1161 ntBASIC10.21□□□□□ -0.77
KRTAP3-3Q9BYR6 AC091905.1-201ENST00000624400 311 ntBASIC10.21□□□□□ -0.77
KRTAP3-3Q9BYR6 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC10.21□□□□□ -0.77
KRTAP3-3Q9BYR6 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
KRTAP3-3Q9BYR6 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC10.21□□□□□ -0.78
KRTAP3-3Q9BYR6 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
KRTAP3-3Q9BYR6 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
KRTAP3-3Q9BYR6 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
KRTAP3-3Q9BYR6 SFR1-202ENST00000369729 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
KRTAP3-3Q9BYR6 RPF2-203ENST00000441448 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
KRTAP3-3Q9BYR6 ZNF121-201ENST00000320451 1563 ntAPPRIS P1 TSL 3 BASIC10.21□□□□□ -0.78
KRTAP3-3Q9BYR6 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.78
KRTAP3-3Q9BYR6 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
KRTAP3-3Q9BYR6 AC012085.2-201ENST00000550287 1587 ntTSL 2 BASIC10.21□□□□□ -0.78
KRTAP3-3Q9BYR6 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC10.21□□□□□ -0.78
KRTAP3-3Q9BYR6 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
KRTAP3-3Q9BYR6 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC10.21□□□□□ -0.78
KRTAP3-3Q9BYR6 ARFGAP3-203ENST00000437119 1650 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
KRTAP3-3Q9BYR6 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
KRTAP3-3Q9BYR6 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
KRTAP3-3Q9BYR6 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC10.21□□□□□ -0.78
KRTAP3-3Q9BYR6 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
KRTAP3-3Q9BYR6 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.78
KRTAP3-3Q9BYR6 USP39-204ENST00000409766 2033 ntTSL 2 BASIC10.21□□□□□ -0.78
KRTAP3-3Q9BYR6 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.78
KRTAP3-3Q9BYR6 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC10.21□□□□□ -0.78
KRTAP3-3Q9BYR6 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
KRTAP3-3Q9BYR6 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
KRTAP3-3Q9BYR6 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
KRTAP3-3Q9BYR6 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC10.21□□□□□ -0.78
KRTAP3-3Q9BYR6 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
KRTAP3-3Q9BYR6 AC112907.3-201ENST00000577781 2400 ntBASIC10.21□□□□□ -0.78
KRTAP3-3Q9BYR6 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
KRTAP3-3Q9BYR6 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 GRP-201ENST00000256857 848 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 RNU4-51P-201ENST00000364206 140 ntBASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 SNORD51.1-201ENST00000365405 77 ntBASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 TCAIM-202ENST00000383746 1998 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 RNU5A-6P-201ENST00000384136 116 ntBASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 NRG3-204ENST00000404576 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms