Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SSBP4Q9BWG4 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
SSBP4Q9BWG4 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
SSBP4Q9BWG4 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SSBP4Q9BWG4 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SSBP4Q9BWG4 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SSBP4Q9BWG4 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SSBP4Q9BWG4 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SSBP4Q9BWG4 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SSBP4Q9BWG4 GPAA1P2-202ENST00000606848 1787 ntBASIC12.18□□□□□ -0.46
SSBP4Q9BWG4 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SSBP4Q9BWG4 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SSBP4Q9BWG4 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC12.18□□□□□ -0.46
SSBP4Q9BWG4 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC12.18□□□□□ -0.46
SSBP4Q9BWG4 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 DKFZP434A062-201ENST00000573103 5021 ntBASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 IGHV3-47-201ENST00000425060 335 ntBASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 KRT17P6-201ENST00000453795 1220 ntBASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 AC096582.2-201ENST00000510860 516 ntBASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 GZMM-202ENST00000592501 941 ntTSL 3 BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 AC010654.1-201ENST00000615722 808 ntBASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC12.17□□□□□ -0.46
SSBP4Q9BWG4 NSUN5P1-202ENST00000421140 1535 ntBASIC12.16□□□□□ -0.46
SSBP4Q9BWG4 NSUN5P2-203ENST00000457352 1529 ntBASIC12.16□□□□□ -0.46
SSBP4Q9BWG4 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC12.16□□□□□ -0.46
SSBP4Q9BWG4 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP4Q9BWG4 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP4Q9BWG4 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC12.16□□□□□ -0.46
SSBP4Q9BWG4 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP4Q9BWG4 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP4Q9BWG4 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP4Q9BWG4 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP4Q9BWG4 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
SSBP4Q9BWG4 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP4Q9BWG4 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP4Q9BWG4 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSBP4Q9BWG4 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms