Protein–RNA interactions for Protein: Q99741

CDC6, Cell division control protein 6 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6Q99741 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CDC6Q99741 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDC6Q99741 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDC6Q99741 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDC6Q99741 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDC6Q99741 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDC6Q99741 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDC6Q99741 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDC6Q99741 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDC6Q99741 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDC6Q99741 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDC6Q99741 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.38■□□□□ 0.05
CDC6Q99741 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.38■□□□□ 0.05
CDC6Q99741 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDC6Q99741 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDC6Q99741 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDC6Q99741 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDC6Q99741 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC15.38■□□□□ 0.05
CDC6Q99741 AC012441.1-201ENST00000446669 685 ntBASIC15.38■□□□□ 0.05
CDC6Q99741 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDC6Q99741 FTH1P14-201ENST00000482930 551 ntBASIC15.38■□□□□ 0.05
CDC6Q99741 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDC6Q99741 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.38■□□□□ 0.05
CDC6Q99741 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDC6Q99741 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.38■□□□□ 0.05
CDC6Q99741 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC15.38■□□□□ 0.05
CDC6Q99741 RN7SL560P-201ENST00000577943 264 ntBASIC15.38■□□□□ 0.05
CDC6Q99741 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDC6Q99741 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CDC6Q99741 AC091271.1-201ENST00000611877 1162 ntBASIC15.38■□□□□ 0.05
CDC6Q99741 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.38■□□□□ 0.05
CDC6Q99741 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.38■□□□□ 0.05
CDC6Q99741 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDC6Q99741 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDC6Q99741 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.38■□□□□ 0.05
CDC6Q99741 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.38■□□□□ 0.05
CDC6Q99741 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDC6Q99741 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CDC6Q99741 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDC6Q99741 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDC6Q99741 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDC6Q99741 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDC6Q99741 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.38■□□□□ 0.05
CDC6Q99741 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.38■□□□□ 0.05
CDC6Q99741 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CDC6Q99741 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDC6Q99741 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDC6Q99741 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
CDC6Q99741 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDC6Q99741 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDC6Q99741 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDC6Q99741 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.37■□□□□ 0.05
CDC6Q99741 AC080080.1-201ENST00000625121 2420 ntBASIC15.37■□□□□ 0.05
CDC6Q99741 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDC6Q99741 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDC6Q99741 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDC6Q99741 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDC6Q99741 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.37■□□□□ 0.05
CDC6Q99741 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDC6Q99741 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
CDC6Q99741 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CDC6Q99741 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.37■□□□□ 0.05
CDC6Q99741 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.37■□□□□ 0.05
CDC6Q99741 C2orf27AP3-201ENST00000434123 579 ntBASIC15.37■□□□□ 0.05
CDC6Q99741 TARDBPP1-201ENST00000442013 1203 ntBASIC15.37■□□□□ 0.05
CDC6Q99741 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDC6Q99741 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDC6Q99741 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
CDC6Q99741 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.37■□□□□ 0.05
CDC6Q99741 DUX4L45-201ENST00000566406 1057 ntBASIC15.37■□□□□ 0.05
CDC6Q99741 AL049840.4-201ENST00000602422 811 ntBASIC15.37■□□□□ 0.05
CDC6Q99741 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.37■□□□□ 0.05
CDC6Q99741 AL354718.3-201ENST00000616414 581 ntBASIC15.37■□□□□ 0.05
CDC6Q99741 CR382287.1-201ENST00000623954 586 ntBASIC15.37■□□□□ 0.05
CDC6Q99741 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDC6Q99741 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDC6Q99741 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDC6Q99741 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.37■□□□□ 0.05
CDC6Q99741 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.37■□□□□ 0.05
CDC6Q99741 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDC6Q99741 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.37■□□□□ 0.05
CDC6Q99741 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDC6Q99741 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CDC6Q99741 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.37■□□□□ 0.05
CDC6Q99741 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDC6Q99741 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDC6Q99741 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.36■□□□□ 0.05
CDC6Q99741 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDC6Q99741 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CDC6Q99741 PKD1P5-201ENST00000532415 10291 ntBASIC15.36■□□□□ 0.05
CDC6Q99741 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDC6Q99741 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.36■□□□□ 0.05
CDC6Q99741 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CDC6Q99741 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDC6Q99741 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDC6Q99741 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.36■□□□□ 0.05
CDC6Q99741 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDC6Q99741 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDC6Q99741 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.36■□□□□ 0.05
CDC6Q99741 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms