Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.91■□□□□ 0.62
NEK1Q96PY6 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC18.91■□□□□ 0.62
NEK1Q96PY6 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.91■□□□□ 0.62
NEK1Q96PY6 AC109322.1-201ENST00000524499 1264 ntBASIC18.91■□□□□ 0.62
NEK1Q96PY6 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NEK1Q96PY6 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.91■□□□□ 0.62
NEK1Q96PY6 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18.91■□□□□ 0.62
NEK1Q96PY6 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
NEK1Q96PY6 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
NEK1Q96PY6 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NEK1Q96PY6 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
NEK1Q96PY6 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NEK1Q96PY6 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
NEK1Q96PY6 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
NEK1Q96PY6 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC18.91■□□□□ 0.62
NEK1Q96PY6 AL035456.1-201ENST00000456064 1369 ntBASIC18.91■□□□□ 0.62
NEK1Q96PY6 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC18.91■□□□□ 0.62
NEK1Q96PY6 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC18.9■□□□□ 0.62
NEK1Q96PY6 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
NEK1Q96PY6 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
NEK1Q96PY6 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NEK1Q96PY6 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC18.9■□□□□ 0.62
NEK1Q96PY6 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NEK1Q96PY6 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
NEK1Q96PY6 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NEK1Q96PY6 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
NEK1Q96PY6 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NEK1Q96PY6 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
NEK1Q96PY6 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
NEK1Q96PY6 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NEK1Q96PY6 AL139400.1-201ENST00000366220 510 ntBASIC18.9■□□□□ 0.62
NEK1Q96PY6 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
NEK1Q96PY6 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.9■□□□□ 0.62
NEK1Q96PY6 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NEK1Q96PY6 SPDYE17-201ENST00000412399 783 ntBASIC18.9■□□□□ 0.62
NEK1Q96PY6 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.9■□□□□ 0.62
NEK1Q96PY6 AC069262.1-201ENST00000539058 672 ntBASIC18.9■□□□□ 0.62
NEK1Q96PY6 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NEK1Q96PY6 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NEK1Q96PY6 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.9■□□□□ 0.62
NEK1Q96PY6 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC18.9■□□□□ 0.62
NEK1Q96PY6 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
NEK1Q96PY6 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC18.9■□□□□ 0.62
NEK1Q96PY6 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NEK1Q96PY6 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NEK1Q96PY6 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NEK1Q96PY6 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC18.9■□□□□ 0.62
NEK1Q96PY6 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NEK1Q96PY6 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC18.9■□□□□ 0.62
NEK1Q96PY6 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NEK1Q96PY6 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NEK1Q96PY6 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NEK1Q96PY6 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC18.9■□□□□ 0.62
NEK1Q96PY6 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NEK1Q96PY6 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NEK1Q96PY6 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC18.89■□□□□ 0.62
NEK1Q96PY6 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
NEK1Q96PY6 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.89■□□□□ 0.62
NEK1Q96PY6 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
NEK1Q96PY6 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
NEK1Q96PY6 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
NEK1Q96PY6 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.62
NEK1Q96PY6 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC18.89■□□□□ 0.61
NEK1Q96PY6 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC18.89■□□□□ 0.61
NEK1Q96PY6 AC092127.1-201ENST00000567093 3455 ntBASIC18.89■□□□□ 0.61
NEK1Q96PY6 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NEK1Q96PY6 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NEK1Q96PY6 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NEK1Q96PY6 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
NEK1Q96PY6 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NEK1Q96PY6 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NEK1Q96PY6 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NEK1Q96PY6 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NEK1Q96PY6 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NEK1Q96PY6 RAC2-202ENST00000401529 569 ntTSL 4 BASIC18.89■□□□□ 0.61
NEK1Q96PY6 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
NEK1Q96PY6 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.89■□□□□ 0.61
NEK1Q96PY6 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NEK1Q96PY6 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC18.89■□□□□ 0.61
NEK1Q96PY6 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.89■□□□□ 0.61
NEK1Q96PY6 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC18.89■□□□□ 0.61
NEK1Q96PY6 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC18.89■□□□□ 0.61
NEK1Q96PY6 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
NEK1Q96PY6 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC18.89■□□□□ 0.61
NEK1Q96PY6 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC18.89■□□□□ 0.61
NEK1Q96PY6 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NEK1Q96PY6 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.89■□□□□ 0.61
NEK1Q96PY6 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NEK1Q96PY6 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
NEK1Q96PY6 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NEK1Q96PY6 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NEK1Q96PY6 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC18.88■□□□□ 0.61
NEK1Q96PY6 AC020658.6-201ENST00000623564 1870 ntBASIC18.88■□□□□ 0.61
NEK1Q96PY6 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NEK1Q96PY6 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.88■□□□□ 0.61
NEK1Q96PY6 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NEK1Q96PY6 TKT-202ENST00000423516 2075 ntTSL 2 BASIC18.88■□□□□ 0.61
NEK1Q96PY6 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
NEK1Q96PY6 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NEK1Q96PY6 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms