Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.59■□□□□ 0.09
PDLIM5Q96HC4 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.59■□□□□ 0.09
PDLIM5Q96HC4 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PDLIM5Q96HC4 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PDLIM5Q96HC4 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDLIM5Q96HC4 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.59■□□□□ 0.09
PDLIM5Q96HC4 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
PDLIM5Q96HC4 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.59■□□□□ 0.09
PDLIM5Q96HC4 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDLIM5Q96HC4 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDLIM5Q96HC4 KRT8P12-202ENST00000472924 1397 ntBASIC15.59■□□□□ 0.09
PDLIM5Q96HC4 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PDLIM5Q96HC4 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PDLIM5Q96HC4 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDLIM5Q96HC4 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDLIM5Q96HC4 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDLIM5Q96HC4 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDLIM5Q96HC4 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PDLIM5Q96HC4 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.59■□□□□ 0.09
PDLIM5Q96HC4 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.59■□□□□ 0.09
PDLIM5Q96HC4 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
PDLIM5Q96HC4 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
PDLIM5Q96HC4 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
PDLIM5Q96HC4 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.58■□□□□ 0.09
PDLIM5Q96HC4 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PDLIM5Q96HC4 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
PDLIM5Q96HC4 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.58■□□□□ 0.09
PDLIM5Q96HC4 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
PDLIM5Q96HC4 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
PDLIM5Q96HC4 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
PDLIM5Q96HC4 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDLIM5Q96HC4 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDLIM5Q96HC4 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDLIM5Q96HC4 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDLIM5Q96HC4 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PDLIM5Q96HC4 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PDLIM5Q96HC4 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
PDLIM5Q96HC4 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PDLIM5Q96HC4 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDLIM5Q96HC4 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDLIM5Q96HC4 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.58■□□□□ 0.08
PDLIM5Q96HC4 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDLIM5Q96HC4 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.58■□□□□ 0.08
PDLIM5Q96HC4 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
PDLIM5Q96HC4 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
PDLIM5Q96HC4 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PDLIM5Q96HC4 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDLIM5Q96HC4 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.58■□□□□ 0.08
PDLIM5Q96HC4 AZGP1P1-201ENST00000411909 902 ntBASIC15.58■□□□□ 0.08
PDLIM5Q96HC4 SPDYE7P-202ENST00000420373 878 ntBASIC15.58■□□□□ 0.08
PDLIM5Q96HC4 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.58■□□□□ 0.08
PDLIM5Q96HC4 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.58■□□□□ 0.08
PDLIM5Q96HC4 HIST3H2BA-201ENST00000436555 524 ntBASIC15.58■□□□□ 0.08
PDLIM5Q96HC4 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.58■□□□□ 0.08
PDLIM5Q96HC4 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.58■□□□□ 0.08
PDLIM5Q96HC4 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PDLIM5Q96HC4 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDLIM5Q96HC4 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
PDLIM5Q96HC4 AC003101.2-201ENST00000612557 442 ntBASIC15.58■□□□□ 0.08
PDLIM5Q96HC4 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.58■□□□□ 0.08
PDLIM5Q96HC4 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.58■□□□□ 0.08
PDLIM5Q96HC4 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDLIM5Q96HC4 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.58■□□□□ 0.08
PDLIM5Q96HC4 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDLIM5Q96HC4 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
PDLIM5Q96HC4 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDLIM5Q96HC4 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PDLIM5Q96HC4 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PDLIM5Q96HC4 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
PDLIM5Q96HC4 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDLIM5Q96HC4 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDLIM5Q96HC4 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
PDLIM5Q96HC4 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDLIM5Q96HC4 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDLIM5Q96HC4 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDLIM5Q96HC4 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
PDLIM5Q96HC4 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.58■□□□□ 0.08
PDLIM5Q96HC4 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
PDLIM5Q96HC4 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
PDLIM5Q96HC4 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PDLIM5Q96HC4 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PDLIM5Q96HC4 AC127383.1-201ENST00000444697 1800 ntBASIC15.57■□□□□ 0.08
PDLIM5Q96HC4 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDLIM5Q96HC4 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDLIM5Q96HC4 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDLIM5Q96HC4 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.57■□□□□ 0.08
PDLIM5Q96HC4 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
PDLIM5Q96HC4 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDLIM5Q96HC4 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PDLIM5Q96HC4 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
PDLIM5Q96HC4 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDLIM5Q96HC4 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.57■□□□□ 0.08
PDLIM5Q96HC4 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDLIM5Q96HC4 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDLIM5Q96HC4 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.57■□□□□ 0.08
PDLIM5Q96HC4 AL645939.2-201ENST00000427340 991 ntBASIC15.57■□□□□ 0.08
PDLIM5Q96HC4 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.57■□□□□ 0.08
PDLIM5Q96HC4 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDLIM5Q96HC4 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PDLIM5Q96HC4 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms