Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SIPA1Q96FS4 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16■□□□□ 0.15
SIPA1Q96FS4 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16■□□□□ 0.15
SIPA1Q96FS4 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16■□□□□ 0.15
SIPA1Q96FS4 AC234783.1-201ENST00000441761 496 ntBASIC16■□□□□ 0.15
SIPA1Q96FS4 TARDBPP1-201ENST00000442013 1203 ntBASIC16■□□□□ 0.15
SIPA1Q96FS4 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16■□□□□ 0.15
SIPA1Q96FS4 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16■□□□□ 0.15
SIPA1Q96FS4 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16■□□□□ 0.15
SIPA1Q96FS4 AC015936.2-201ENST00000593177 259 ntBASIC16■□□□□ 0.15
SIPA1Q96FS4 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
SIPA1Q96FS4 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16■□□□□ 0.15
SIPA1Q96FS4 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SIPA1Q96FS4 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16■□□□□ 0.15
SIPA1Q96FS4 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16■□□□□ 0.15
SIPA1Q96FS4 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16■□□□□ 0.15
SIPA1Q96FS4 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16■□□□□ 0.15
SIPA1Q96FS4 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16■□□□□ 0.15
SIPA1Q96FS4 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SIPA1Q96FS4 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16■□□□□ 0.15
SIPA1Q96FS4 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16■□□□□ 0.15
SIPA1Q96FS4 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SIPA1Q96FS4 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16■□□□□ 0.15
SIPA1Q96FS4 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SIPA1Q96FS4 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16■□□□□ 0.15
SIPA1Q96FS4 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SIPA1Q96FS4 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SIPA1Q96FS4 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SIPA1Q96FS4 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16■□□□□ 0.15
SIPA1Q96FS4 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.99■□□□□ 0.15
SIPA1Q96FS4 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.99■□□□□ 0.15
SIPA1Q96FS4 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SIPA1Q96FS4 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
SIPA1Q96FS4 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.99■□□□□ 0.15
SIPA1Q96FS4 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SIPA1Q96FS4 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SIPA1Q96FS4 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
SIPA1Q96FS4 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SIPA1Q96FS4 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
SIPA1Q96FS4 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
SIPA1Q96FS4 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SIPA1Q96FS4 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SIPA1Q96FS4 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
SIPA1Q96FS4 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SIPA1Q96FS4 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.99■□□□□ 0.15
SIPA1Q96FS4 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15.99■□□□□ 0.15
SIPA1Q96FS4 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.99■□□□□ 0.15
SIPA1Q96FS4 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SIPA1Q96FS4 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC15.99■□□□□ 0.15
SIPA1Q96FS4 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SIPA1Q96FS4 HLA-V-201ENST00000429037 534 ntBASIC15.99■□□□□ 0.15
SIPA1Q96FS4 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SIPA1Q96FS4 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.99■□□□□ 0.15
SIPA1Q96FS4 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
SIPA1Q96FS4 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.99■□□□□ 0.15
SIPA1Q96FS4 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SIPA1Q96FS4 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.99■□□□□ 0.15
SIPA1Q96FS4 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
SIPA1Q96FS4 AL512343.1-201ENST00000605837 169 ntBASIC15.99■□□□□ 0.15
SIPA1Q96FS4 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.99■□□□□ 0.15
SIPA1Q96FS4 AL158212.4-201ENST00000624062 1286 ntBASIC15.99■□□□□ 0.15
SIPA1Q96FS4 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
SIPA1Q96FS4 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.99■□□□□ 0.15
SIPA1Q96FS4 AL513477.1-201ENST00000602865 2407 ntBASIC15.99■□□□□ 0.15
SIPA1Q96FS4 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.99■□□□□ 0.15
SIPA1Q96FS4 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SIPA1Q96FS4 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SIPA1Q96FS4 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SIPA1Q96FS4 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SIPA1Q96FS4 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
SIPA1Q96FS4 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SIPA1Q96FS4 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
SIPA1Q96FS4 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.99■□□□□ 0.15
SIPA1Q96FS4 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SIPA1Q96FS4 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SIPA1Q96FS4 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SIPA1Q96FS4 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.99■□□□□ 0.15
SIPA1Q96FS4 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SIPA1Q96FS4 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SIPA1Q96FS4 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.98■□□□□ 0.15
SIPA1Q96FS4 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
SIPA1Q96FS4 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
SIPA1Q96FS4 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
SIPA1Q96FS4 ALOX12P2-203ENST00000570921 1945 ntBASIC15.98■□□□□ 0.15
SIPA1Q96FS4 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SIPA1Q96FS4 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SIPA1Q96FS4 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
SIPA1Q96FS4 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SIPA1Q96FS4 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
SIPA1Q96FS4 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
SIPA1Q96FS4 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
SIPA1Q96FS4 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SIPA1Q96FS4 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SIPA1Q96FS4 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SIPA1Q96FS4 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.98■□□□□ 0.15
SIPA1Q96FS4 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SIPA1Q96FS4 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.98■□□□□ 0.15
SIPA1Q96FS4 AC022210.1-201ENST00000449856 793 ntBASIC15.98■□□□□ 0.15
SIPA1Q96FS4 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.98■□□□□ 0.15
SIPA1Q96FS4 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms