Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDCA5Q96FF9 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CDCA5Q96FF9 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDCA5Q96FF9 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CDCA5Q96FF9 AL354989.2-201ENST00000435838 1540 ntBASIC18.44■□□□□ 0.54
CDCA5Q96FF9 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CDCA5Q96FF9 AC139713.2-201ENST00000641328 2723 ntBASIC18.43■□□□□ 0.54
CDCA5Q96FF9 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDCA5Q96FF9 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDCA5Q96FF9 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC18.43■□□□□ 0.54
CDCA5Q96FF9 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
CDCA5Q96FF9 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDCA5Q96FF9 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDCA5Q96FF9 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CDCA5Q96FF9 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDCA5Q96FF9 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
CDCA5Q96FF9 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDCA5Q96FF9 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC18.43■□□□□ 0.54
CDCA5Q96FF9 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDCA5Q96FF9 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDCA5Q96FF9 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
CDCA5Q96FF9 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDCA5Q96FF9 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CDCA5Q96FF9 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDCA5Q96FF9 AL133267.1-201ENST00000398220 340 ntBASIC18.43■□□□□ 0.54
CDCA5Q96FF9 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC18.43■□□□□ 0.54
CDCA5Q96FF9 AC016700.1-201ENST00000429424 312 ntBASIC18.43■□□□□ 0.54
CDCA5Q96FF9 PTPA-217ENST00000434095 870 ntTSL 2 BASIC18.43■□□□□ 0.54
CDCA5Q96FF9 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC18.43■□□□□ 0.54
CDCA5Q96FF9 AC253536.4-201ENST00000440539 267 ntBASIC18.43■□□□□ 0.54
CDCA5Q96FF9 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CDCA5Q96FF9 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
CDCA5Q96FF9 AC245884.6-201ENST00000515672 1067 ntBASIC18.43■□□□□ 0.54
CDCA5Q96FF9 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC18.43■□□□□ 0.54
CDCA5Q96FF9 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC18.43■□□□□ 0.54
CDCA5Q96FF9 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
CDCA5Q96FF9 BX539320.1-201ENST00000623759 877 ntBASIC18.43■□□□□ 0.54
CDCA5Q96FF9 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CDCA5Q96FF9 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDCA5Q96FF9 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDCA5Q96FF9 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CDCA5Q96FF9 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CDCA5Q96FF9 RNF216P1-203ENST00000404404 2427 ntBASIC18.43■□□□□ 0.54
CDCA5Q96FF9 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.43■□□□□ 0.54
CDCA5Q96FF9 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.43■□□□□ 0.54
CDCA5Q96FF9 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDCA5Q96FF9 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDCA5Q96FF9 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDCA5Q96FF9 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC18.43■□□□□ 0.54
CDCA5Q96FF9 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDCA5Q96FF9 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CDCA5Q96FF9 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDCA5Q96FF9 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CDCA5Q96FF9 AC078925.2-201ENST00000624013 1973 ntBASIC18.42■□□□□ 0.54
CDCA5Q96FF9 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC18.42■□□□□ 0.54
CDCA5Q96FF9 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDCA5Q96FF9 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDCA5Q96FF9 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.42■□□□□ 0.54
CDCA5Q96FF9 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDCA5Q96FF9 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDCA5Q96FF9 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDCA5Q96FF9 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.42■□□□□ 0.54
CDCA5Q96FF9 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDCA5Q96FF9 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDCA5Q96FF9 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDCA5Q96FF9 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDCA5Q96FF9 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDCA5Q96FF9 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC18.42■□□□□ 0.54
CDCA5Q96FF9 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC18.42■□□□□ 0.54
CDCA5Q96FF9 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC18.42■□□□□ 0.54
CDCA5Q96FF9 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDCA5Q96FF9 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDCA5Q96FF9 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC18.42■□□□□ 0.54
CDCA5Q96FF9 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC18.42■□□□□ 0.54
CDCA5Q96FF9 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC18.42■□□□□ 0.54
CDCA5Q96FF9 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDCA5Q96FF9 AL023775.1-201ENST00000454907 1746 ntBASIC18.42■□□□□ 0.54
CDCA5Q96FF9 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC18.42■□□□□ 0.54
CDCA5Q96FF9 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDCA5Q96FF9 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.42■□□□□ 0.54
CDCA5Q96FF9 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDCA5Q96FF9 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.42■□□□□ 0.54
CDCA5Q96FF9 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDCA5Q96FF9 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDCA5Q96FF9 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDCA5Q96FF9 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDCA5Q96FF9 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CDCA5Q96FF9 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDCA5Q96FF9 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC18.41■□□□□ 0.54
CDCA5Q96FF9 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC18.41■□□□□ 0.54
CDCA5Q96FF9 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDCA5Q96FF9 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
CDCA5Q96FF9 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDCA5Q96FF9 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDCA5Q96FF9 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC18.41■□□□□ 0.54
CDCA5Q96FF9 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC18.41■□□□□ 0.54
CDCA5Q96FF9 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC18.41■□□□□ 0.54
CDCA5Q96FF9 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CDCA5Q96FF9 CU633904.3-201ENST00000624042 1029 ntBASIC18.41■□□□□ 0.54
CDCA5Q96FF9 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms