Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
RFT1Q96AA3 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
RFT1Q96AA3 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
RFT1Q96AA3 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
RFT1Q96AA3 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RFT1Q96AA3 LINC01144-201ENST00000626198 1710 ntBASIC14.25□□□□□ -0.13
RFT1Q96AA3 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.25□□□□□ -0.13
RFT1Q96AA3 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RFT1Q96AA3 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14.25□□□□□ -0.13
RFT1Q96AA3 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RFT1Q96AA3 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.25□□□□□ -0.13
RFT1Q96AA3 AC073648.2-201ENST00000510116 352 ntBASIC14.25□□□□□ -0.13
RFT1Q96AA3 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
RFT1Q96AA3 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.25□□□□□ -0.13
RFT1Q96AA3 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
RFT1Q96AA3 TBCB-205ENST00000585746 875 ntTSL 3 BASIC14.25□□□□□ -0.13
RFT1Q96AA3 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RFT1Q96AA3 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RFT1Q96AA3 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
RFT1Q96AA3 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.25□□□□□ -0.13
RFT1Q96AA3 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RFT1Q96AA3 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
RFT1Q96AA3 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
RFT1Q96AA3 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RFT1Q96AA3 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RFT1Q96AA3 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.25□□□□□ -0.13
RFT1Q96AA3 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.25□□□□□ -0.13
RFT1Q96AA3 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RFT1Q96AA3 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.25□□□□□ -0.13
RFT1Q96AA3 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.25□□□□□ -0.13
RFT1Q96AA3 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.25□□□□□ -0.13
RFT1Q96AA3 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
RFT1Q96AA3 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RFT1Q96AA3 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RFT1Q96AA3 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RFT1Q96AA3 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RFT1Q96AA3 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
RFT1Q96AA3 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RFT1Q96AA3 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RFT1Q96AA3 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RFT1Q96AA3 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RFT1Q96AA3 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RFT1Q96AA3 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RFT1Q96AA3 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RFT1Q96AA3 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RFT1Q96AA3 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RFT1Q96AA3 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.24□□□□□ -0.13
RFT1Q96AA3 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
RFT1Q96AA3 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
RFT1Q96AA3 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.24□□□□□ -0.13
RFT1Q96AA3 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RFT1Q96AA3 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RFT1Q96AA3 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.24□□□□□ -0.13
RFT1Q96AA3 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RFT1Q96AA3 AC092919.2-201ENST00000623631 1645 ntBASIC14.24□□□□□ -0.13
RFT1Q96AA3 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RFT1Q96AA3 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RFT1Q96AA3 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RFT1Q96AA3 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.24□□□□□ -0.13
RFT1Q96AA3 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.24□□□□□ -0.13
RFT1Q96AA3 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.24□□□□□ -0.13
RFT1Q96AA3 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.24□□□□□ -0.13
RFT1Q96AA3 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.24□□□□□ -0.13
RFT1Q96AA3 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC14.24□□□□□ -0.13
RFT1Q96AA3 AC087641.1-201ENST00000557561 1021 ntBASIC14.24□□□□□ -0.13
RFT1Q96AA3 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
RFT1Q96AA3 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RFT1Q96AA3 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.24□□□□□ -0.13
RFT1Q96AA3 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
RFT1Q96AA3 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RFT1Q96AA3 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.24□□□□□ -0.13
RFT1Q96AA3 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RFT1Q96AA3 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RFT1Q96AA3 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RFT1Q96AA3 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RFT1Q96AA3 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.24□□□□□ -0.13
RFT1Q96AA3 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.24□□□□□ -0.13
RFT1Q96AA3 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.24□□□□□ -0.13
RFT1Q96AA3 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RFT1Q96AA3 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RFT1Q96AA3 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RFT1Q96AA3 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
RFT1Q96AA3 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RFT1Q96AA3 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RFT1Q96AA3 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RFT1Q96AA3 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
RFT1Q96AA3 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
RFT1Q96AA3 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RFT1Q96AA3 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RFT1Q96AA3 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RFT1Q96AA3 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RFT1Q96AA3 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RFT1Q96AA3 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.23□□□□□ -0.13
RFT1Q96AA3 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
RFT1Q96AA3 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RFT1Q96AA3 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RFT1Q96AA3 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.23□□□□□ -0.13
RFT1Q96AA3 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RFT1Q96AA3 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
RFT1Q96AA3 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms