Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
USP6NLQ92738 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC17.98■□□□□ 0.47
USP6NLQ92738 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC17.98■□□□□ 0.47
USP6NLQ92738 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC17.98■□□□□ 0.47
USP6NLQ92738 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC17.98■□□□□ 0.47
USP6NLQ92738 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.98■□□□□ 0.47
USP6NLQ92738 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
USP6NLQ92738 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
USP6NLQ92738 REXO1L8P-201ENST00000604378 1897 ntBASIC17.98■□□□□ 0.47
USP6NLQ92738 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
USP6NLQ92738 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
USP6NLQ92738 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.98■□□□□ 0.47
USP6NLQ92738 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
USP6NLQ92738 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
USP6NLQ92738 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
USP6NLQ92738 AC084018.2-201ENST00000613093 2607 ntBASIC17.98■□□□□ 0.47
USP6NLQ92738 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
USP6NLQ92738 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
USP6NLQ92738 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
USP6NLQ92738 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
USP6NLQ92738 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC17.98■□□□□ 0.47
USP6NLQ92738 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP6NLQ92738 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP6NLQ92738 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
USP6NLQ92738 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP6NLQ92738 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
USP6NLQ92738 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP6NLQ92738 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP6NLQ92738 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP6NLQ92738 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
USP6NLQ92738 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
USP6NLQ92738 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP6NLQ92738 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
USP6NLQ92738 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP6NLQ92738 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP6NLQ92738 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
USP6NLQ92738 AC105020.1-201ENST00000435356 2205 ntBASIC17.97■□□□□ 0.47
USP6NLQ92738 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC17.97■□□□□ 0.47
USP6NLQ92738 ACKR1-201ENST00000368121 1240 ntBASIC17.97■□□□□ 0.47
USP6NLQ92738 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.97■□□□□ 0.47
USP6NLQ92738 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.97■□□□□ 0.47
USP6NLQ92738 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
USP6NLQ92738 PHKG1P2-201ENST00000457537 863 ntBASIC17.97■□□□□ 0.47
USP6NLQ92738 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC17.97■□□□□ 0.47
USP6NLQ92738 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17.97■□□□□ 0.47
USP6NLQ92738 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC17.97■□□□□ 0.47
USP6NLQ92738 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC17.97■□□□□ 0.47
USP6NLQ92738 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.97■□□□□ 0.47
USP6NLQ92738 RN7SL560P-201ENST00000577943 264 ntBASIC17.97■□□□□ 0.47
USP6NLQ92738 ATF5-205ENST00000600336 682 ntTSL 2 BASIC17.97■□□□□ 0.47
USP6NLQ92738 METTL26-214ENST00000614890 801 ntTSL 3 BASIC17.97■□□□□ 0.47
USP6NLQ92738 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC17.97■□□□□ 0.47
USP6NLQ92738 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC17.97■□□□□ 0.47
USP6NLQ92738 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP6NLQ92738 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP6NLQ92738 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
USP6NLQ92738 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.97■□□□□ 0.47
USP6NLQ92738 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP6NLQ92738 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
USP6NLQ92738 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
USP6NLQ92738 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
USP6NLQ92738 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.97■□□□□ 0.47
USP6NLQ92738 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP6NLQ92738 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
USP6NLQ92738 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP6NLQ92738 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
USP6NLQ92738 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP6NLQ92738 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.97■□□□□ 0.47
USP6NLQ92738 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.96■□□□□ 0.47
USP6NLQ92738 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.96■□□□□ 0.47
USP6NLQ92738 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
USP6NLQ92738 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
USP6NLQ92738 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC17.96■□□□□ 0.47
USP6NLQ92738 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP6NLQ92738 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP6NLQ92738 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
USP6NLQ92738 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
USP6NLQ92738 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
USP6NLQ92738 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP6NLQ92738 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP6NLQ92738 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP6NLQ92738 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
USP6NLQ92738 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP6NLQ92738 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
USP6NLQ92738 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
USP6NLQ92738 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
USP6NLQ92738 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
USP6NLQ92738 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
USP6NLQ92738 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
USP6NLQ92738 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP6NLQ92738 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
USP6NLQ92738 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC17.96■□□□□ 0.47
USP6NLQ92738 AC022137.2-201ENST00000503482 481 ntBASIC17.96■□□□□ 0.47
USP6NLQ92738 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
USP6NLQ92738 HNRNPUP1-201ENST00000554987 333 ntBASIC17.96■□□□□ 0.47
USP6NLQ92738 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC17.96■□□□□ 0.47
USP6NLQ92738 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
USP6NLQ92738 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC17.96■□□□□ 0.47
USP6NLQ92738 AC243960.2-201ENST00000600996 747 ntBASIC17.96■□□□□ 0.47
USP6NLQ92738 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms