Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.98■□□□□ 0.15
HMGB4Q8WW32 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HMGB4Q8WW32 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HMGB4Q8WW32 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
HMGB4Q8WW32 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
HMGB4Q8WW32 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HMGB4Q8WW32 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.98■□□□□ 0.15
HMGB4Q8WW32 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HMGB4Q8WW32 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HMGB4Q8WW32 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
HMGB4Q8WW32 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.98■□□□□ 0.15
HMGB4Q8WW32 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.98■□□□□ 0.15
HMGB4Q8WW32 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.98■□□□□ 0.15
HMGB4Q8WW32 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.98■□□□□ 0.15
HMGB4Q8WW32 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.98■□□□□ 0.15
HMGB4Q8WW32 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC15.98■□□□□ 0.15
HMGB4Q8WW32 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.98■□□□□ 0.15
HMGB4Q8WW32 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
HMGB4Q8WW32 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
HMGB4Q8WW32 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.98■□□□□ 0.15
HMGB4Q8WW32 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.98■□□□□ 0.15
HMGB4Q8WW32 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC15.98■□□□□ 0.15
HMGB4Q8WW32 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HMGB4Q8WW32 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HMGB4Q8WW32 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.98■□□□□ 0.15
HMGB4Q8WW32 AC005052.1-201ENST00000625181 2492 ntBASIC15.98■□□□□ 0.15
HMGB4Q8WW32 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
HMGB4Q8WW32 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
HMGB4Q8WW32 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
HMGB4Q8WW32 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HMGB4Q8WW32 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HMGB4Q8WW32 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HMGB4Q8WW32 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
HMGB4Q8WW32 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HMGB4Q8WW32 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.98■□□□□ 0.15
HMGB4Q8WW32 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.98■□□□□ 0.15
HMGB4Q8WW32 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HMGB4Q8WW32 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HMGB4Q8WW32 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
HMGB4Q8WW32 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.98■□□□□ 0.15
HMGB4Q8WW32 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HMGB4Q8WW32 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
HMGB4Q8WW32 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGB4Q8WW32 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HMGB4Q8WW32 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGB4Q8WW32 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGB4Q8WW32 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGB4Q8WW32 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGB4Q8WW32 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGB4Q8WW32 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
HMGB4Q8WW32 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HMGB4Q8WW32 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HMGB4Q8WW32 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGB4Q8WW32 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGB4Q8WW32 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGB4Q8WW32 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
HMGB4Q8WW32 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.97■□□□□ 0.15
HMGB4Q8WW32 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGB4Q8WW32 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.97■□□□□ 0.15
HMGB4Q8WW32 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.97■□□□□ 0.15
HMGB4Q8WW32 BCRP2-202ENST00000447763 634 ntBASIC15.97■□□□□ 0.15
HMGB4Q8WW32 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.97■□□□□ 0.15
HMGB4Q8WW32 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.97■□□□□ 0.15
HMGB4Q8WW32 BCRP6-201ENST00000510112 632 ntBASIC15.97■□□□□ 0.15
HMGB4Q8WW32 BCRP7-201ENST00000511549 544 ntBASIC15.97■□□□□ 0.15
HMGB4Q8WW32 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.97■□□□□ 0.15
HMGB4Q8WW32 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
HMGB4Q8WW32 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC15.97■□□□□ 0.15
HMGB4Q8WW32 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.97■□□□□ 0.15
HMGB4Q8WW32 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC15.97■□□□□ 0.15
HMGB4Q8WW32 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.97■□□□□ 0.15
HMGB4Q8WW32 MIR4525-201ENST00000580000 75 ntBASIC15.97■□□□□ 0.15
HMGB4Q8WW32 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.97■□□□□ 0.15
HMGB4Q8WW32 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.97■□□□□ 0.15
HMGB4Q8WW32 AL022328.1-201ENST00000610050 478 ntBASIC15.97■□□□□ 0.15
HMGB4Q8WW32 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HMGB4Q8WW32 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGB4Q8WW32 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HMGB4Q8WW32 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.97■□□□□ 0.15
HMGB4Q8WW32 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGB4Q8WW32 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGB4Q8WW32 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HMGB4Q8WW32 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGB4Q8WW32 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.97■□□□□ 0.15
HMGB4Q8WW32 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
HMGB4Q8WW32 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
HMGB4Q8WW32 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.97■□□□□ 0.15
HMGB4Q8WW32 REXO1L8P-201ENST00000604378 1897 ntBASIC15.97■□□□□ 0.15
HMGB4Q8WW32 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
HMGB4Q8WW32 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGB4Q8WW32 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
HMGB4Q8WW32 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
HMGB4Q8WW32 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HMGB4Q8WW32 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HMGB4Q8WW32 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HMGB4Q8WW32 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.96■□□□□ 0.15
HMGB4Q8WW32 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HMGB4Q8WW32 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.96■□□□□ 0.15
HMGB4Q8WW32 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HMGB4Q8WW32 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms