Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.32■□□□□ 0.2
PRUNE2Q8WUY3 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRUNE2Q8WUY3 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PRUNE2Q8WUY3 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC16.32■□□□□ 0.2
PRUNE2Q8WUY3 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC16.32■□□□□ 0.2
PRUNE2Q8WUY3 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PRUNE2Q8WUY3 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC16.32■□□□□ 0.2
PRUNE2Q8WUY3 AC007718.1-201ENST00000621078 280 ntBASIC16.32■□□□□ 0.2
PRUNE2Q8WUY3 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC16.32■□□□□ 0.2
PRUNE2Q8WUY3 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRUNE2Q8WUY3 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRUNE2Q8WUY3 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PRUNE2Q8WUY3 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRUNE2Q8WUY3 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRUNE2Q8WUY3 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRUNE2Q8WUY3 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PRUNE2Q8WUY3 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRUNE2Q8WUY3 RPS9P1-201ENST00000419943 583 ntBASIC16.31■□□□□ 0.2
PRUNE2Q8WUY3 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRUNE2Q8WUY3 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRUNE2Q8WUY3 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PRUNE2Q8WUY3 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRUNE2Q8WUY3 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRUNE2Q8WUY3 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRUNE2Q8WUY3 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRUNE2Q8WUY3 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PRUNE2Q8WUY3 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRUNE2Q8WUY3 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC16.31■□□□□ 0.2
PRUNE2Q8WUY3 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC16.31■□□□□ 0.2
PRUNE2Q8WUY3 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC16.31■□□□□ 0.2
PRUNE2Q8WUY3 KRT18P43-201ENST00000469825 1281 ntBASIC16.31■□□□□ 0.2
PRUNE2Q8WUY3 SLED1-202ENST00000512051 380 ntBASIC16.31■□□□□ 0.2
PRUNE2Q8WUY3 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC16.31■□□□□ 0.2
PRUNE2Q8WUY3 AC006158.1-201ENST00000610661 249 ntBASIC16.31■□□□□ 0.2
PRUNE2Q8WUY3 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
PRUNE2Q8WUY3 AP005019.2-201ENST00000615104 511 ntBASIC16.31■□□□□ 0.2
PRUNE2Q8WUY3 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC16.31■□□□□ 0.2
PRUNE2Q8WUY3 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.31■□□□□ 0.2
PRUNE2Q8WUY3 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRUNE2Q8WUY3 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRUNE2Q8WUY3 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
PRUNE2Q8WUY3 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRUNE2Q8WUY3 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRUNE2Q8WUY3 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRUNE2Q8WUY3 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC16.3■□□□□ 0.2
PRUNE2Q8WUY3 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC16.3■□□□□ 0.2
PRUNE2Q8WUY3 DDX39AP1-201ENST00000445147 1181 ntBASIC16.3■□□□□ 0.2
PRUNE2Q8WUY3 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC16.3■□□□□ 0.2
PRUNE2Q8WUY3 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRUNE2Q8WUY3 AC004923.1-202ENST00000642106 209 ntBASIC16.3■□□□□ 0.2
PRUNE2Q8WUY3 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.3■□□□□ 0.2
PRUNE2Q8WUY3 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRUNE2Q8WUY3 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
PRUNE2Q8WUY3 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRUNE2Q8WUY3 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.3■□□□□ 0.2
PRUNE2Q8WUY3 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.3■□□□□ 0.2
PRUNE2Q8WUY3 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRUNE2Q8WUY3 OARD1-204ENST00000464633 717 ntTSL 2 BASIC16.3■□□□□ 0.2
PRUNE2Q8WUY3 AC116345.2-201ENST00000512837 523 ntBASIC16.3■□□□□ 0.2
PRUNE2Q8WUY3 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC16.3■□□□□ 0.2
PRUNE2Q8WUY3 AC105137.3-201ENST00000617588 984 ntBASIC16.3■□□□□ 0.2
PRUNE2Q8WUY3 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRUNE2Q8WUY3 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.3■□□□□ 0.2
PRUNE2Q8WUY3 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRUNE2Q8WUY3 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRUNE2Q8WUY3 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRUNE2Q8WUY3 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
PRUNE2Q8WUY3 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.3■□□□□ 0.2
PRUNE2Q8WUY3 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.3■□□□□ 0.2
PRUNE2Q8WUY3 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PRUNE2Q8WUY3 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.3■□□□□ 0.2
PRUNE2Q8WUY3 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRUNE2Q8WUY3 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRUNE2Q8WUY3 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.3■□□□□ 0.2
PRUNE2Q8WUY3 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC16.3■□□□□ 0.2
PRUNE2Q8WUY3 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC16.3■□□□□ 0.2
PRUNE2Q8WUY3 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PRUNE2Q8WUY3 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.29■□□□□ 0.2
PRUNE2Q8WUY3 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRUNE2Q8WUY3 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRUNE2Q8WUY3 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRUNE2Q8WUY3 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.29■□□□□ 0.2
PRUNE2Q8WUY3 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.29■□□□□ 0.2
PRUNE2Q8WUY3 RTN3P1-201ENST00000536295 711 ntBASIC16.29■□□□□ 0.2
PRUNE2Q8WUY3 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC16.29■□□□□ 0.2
PRUNE2Q8WUY3 C2orf69P1-201ENST00000563532 1093 ntBASIC16.29■□□□□ 0.2
PRUNE2Q8WUY3 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC16.29■□□□□ 0.2
PRUNE2Q8WUY3 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.29■□□□□ 0.2
PRUNE2Q8WUY3 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PRUNE2Q8WUY3 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRUNE2Q8WUY3 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PRUNE2Q8WUY3 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.29■□□□□ 0.2
PRUNE2Q8WUY3 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
PRUNE2Q8WUY3 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRUNE2Q8WUY3 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PRUNE2Q8WUY3 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRUNE2Q8WUY3 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PRUNE2Q8WUY3 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PRUNE2Q8WUY3 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRUNE2Q8WUY3 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms