Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC10.5□□□□□ -0.73
ALMS1Q8TCU4 AP001065.2-201ENST00000617205 644 ntBASIC10.5□□□□□ -0.73
ALMS1Q8TCU4 AC068587.8-201ENST00000641239 219 ntBASIC10.5□□□□□ -0.73
ALMS1Q8TCU4 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
ALMS1Q8TCU4 AC134407.2-201ENST00000625089 1978 ntBASIC10.5□□□□□ -0.73
ALMS1Q8TCU4 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC10.5□□□□□ -0.73
ALMS1Q8TCU4 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
ALMS1Q8TCU4 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC10.5□□□□□ -0.73
ALMS1Q8TCU4 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
ALMS1Q8TCU4 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC10.5□□□□□ -0.73
ALMS1Q8TCU4 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
ALMS1Q8TCU4 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
ALMS1Q8TCU4 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC10.5□□□□□ -0.73
ALMS1Q8TCU4 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
ALMS1Q8TCU4 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC10.5□□□□□ -0.73
ALMS1Q8TCU4 AL136309.1-201ENST00000403917 691 ntBASIC10.5□□□□□ -0.73
ALMS1Q8TCU4 AC019193.1-201ENST00000506678 823 ntBASIC10.5□□□□□ -0.73
ALMS1Q8TCU4 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
ALMS1Q8TCU4 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC10.5□□□□□ -0.73
ALMS1Q8TCU4 AC106820.3-201ENST00000561653 397 ntBASIC10.5□□□□□ -0.73
ALMS1Q8TCU4 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC10.5□□□□□ -0.73
ALMS1Q8TCU4 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
ALMS1Q8TCU4 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
ALMS1Q8TCU4 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
ALMS1Q8TCU4 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
ALMS1Q8TCU4 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
ALMS1Q8TCU4 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
ALMS1Q8TCU4 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
ALMS1Q8TCU4 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
ALMS1Q8TCU4 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
ALMS1Q8TCU4 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC10.5□□□□□ -0.73
ALMS1Q8TCU4 AC012362.1-201ENST00000434906 739 ntBASIC10.5□□□□□ -0.73
ALMS1Q8TCU4 FAM8A4P-201ENST00000435433 1213 ntBASIC10.5□□□□□ -0.73
ALMS1Q8TCU4 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC10.5□□□□□ -0.73
ALMS1Q8TCU4 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC10.5□□□□□ -0.73
ALMS1Q8TCU4 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC10.5□□□□□ -0.73
ALMS1Q8TCU4 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC10.5□□□□□ -0.73
ALMS1Q8TCU4 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
ALMS1Q8TCU4 COX6A1P2-201ENST00000620597 330 ntBASIC10.5□□□□□ -0.73
ALMS1Q8TCU4 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
ALMS1Q8TCU4 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
ALMS1Q8TCU4 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
ALMS1Q8TCU4 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC10.5□□□□□ -0.73
ALMS1Q8TCU4 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 NPPA-201ENST00000376476 728 ntTSL 3 BASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 AC078925.2-201ENST00000624013 1973 ntBASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 AC104073.2-201ENST00000453737 312 ntBASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 IGHV3-37-201ENST00000518544 340 ntBASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 RPL17P45-201ENST00000586289 509 ntBASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 AC020922.3-201ENST00000595064 547 ntBASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 AC009084.3-201ENST00000623356 437 ntBASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 AC011742.3-201ENST00000439053 820 ntBASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 AC006453.1-201ENST00000636037 1257 ntBASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms