Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBA3Q8TBC4 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBA3Q8TBC4 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
UBA3Q8TBC4 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBA3Q8TBC4 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBA3Q8TBC4 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.92■□□□□ 0.3
UBA3Q8TBC4 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBA3Q8TBC4 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBA3Q8TBC4 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBA3Q8TBC4 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.92■□□□□ 0.3
UBA3Q8TBC4 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBA3Q8TBC4 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBA3Q8TBC4 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBA3Q8TBC4 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.92■□□□□ 0.3
UBA3Q8TBC4 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UBA3Q8TBC4 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.92■□□□□ 0.3
UBA3Q8TBC4 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBA3Q8TBC4 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBA3Q8TBC4 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBA3Q8TBC4 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UBA3Q8TBC4 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBA3Q8TBC4 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UBA3Q8TBC4 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBA3Q8TBC4 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.92■□□□□ 0.3
UBA3Q8TBC4 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.92■□□□□ 0.3
UBA3Q8TBC4 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.92■□□□□ 0.3
UBA3Q8TBC4 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
UBA3Q8TBC4 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.92■□□□□ 0.3
UBA3Q8TBC4 AC005498.2-205ENST00000593218 784 ntBASIC16.92■□□□□ 0.3
UBA3Q8TBC4 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.92■□□□□ 0.3
UBA3Q8TBC4 AL158211.3-201ENST00000607385 239 ntBASIC16.92■□□□□ 0.3
UBA3Q8TBC4 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UBA3Q8TBC4 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UBA3Q8TBC4 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.92■□□□□ 0.3
UBA3Q8TBC4 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
UBA3Q8TBC4 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.92■□□□□ 0.3
UBA3Q8TBC4 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBA3Q8TBC4 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBA3Q8TBC4 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UBA3Q8TBC4 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UBA3Q8TBC4 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBA3Q8TBC4 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.92■□□□□ 0.3
UBA3Q8TBC4 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBA3Q8TBC4 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBA3Q8TBC4 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBA3Q8TBC4 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBA3Q8TBC4 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UBA3Q8TBC4 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBA3Q8TBC4 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
UBA3Q8TBC4 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBA3Q8TBC4 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
UBA3Q8TBC4 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBA3Q8TBC4 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBA3Q8TBC4 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBA3Q8TBC4 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
UBA3Q8TBC4 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
UBA3Q8TBC4 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.91■□□□□ 0.3
UBA3Q8TBC4 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBA3Q8TBC4 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBA3Q8TBC4 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBA3Q8TBC4 HIST3H2BA-201ENST00000436555 524 ntBASIC16.91■□□□□ 0.3
UBA3Q8TBC4 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
UBA3Q8TBC4 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.91■□□□□ 0.3
UBA3Q8TBC4 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.91■□□□□ 0.3
UBA3Q8TBC4 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.91■□□□□ 0.3
UBA3Q8TBC4 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.91■□□□□ 0.3
UBA3Q8TBC4 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.91■□□□□ 0.3
UBA3Q8TBC4 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.91■□□□□ 0.3
UBA3Q8TBC4 AL390754.1-201ENST00000619088 582 ntBASIC16.91■□□□□ 0.3
UBA3Q8TBC4 AL590560.3-201ENST00000623350 461 ntBASIC16.91■□□□□ 0.3
UBA3Q8TBC4 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.91■□□□□ 0.3
UBA3Q8TBC4 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBA3Q8TBC4 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
UBA3Q8TBC4 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBA3Q8TBC4 AP005117.1-202ENST00000581724 1908 ntBASIC16.91■□□□□ 0.3
UBA3Q8TBC4 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
UBA3Q8TBC4 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.91■□□□□ 0.3
UBA3Q8TBC4 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBA3Q8TBC4 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
UBA3Q8TBC4 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
UBA3Q8TBC4 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
UBA3Q8TBC4 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.91■□□□□ 0.3
UBA3Q8TBC4 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
UBA3Q8TBC4 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
UBA3Q8TBC4 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.9■□□□□ 0.3
UBA3Q8TBC4 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
UBA3Q8TBC4 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBA3Q8TBC4 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
UBA3Q8TBC4 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
UBA3Q8TBC4 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBA3Q8TBC4 AC100757.3-201ENST00000622361 1406 ntBASIC16.9■□□□□ 0.3
UBA3Q8TBC4 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBA3Q8TBC4 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBA3Q8TBC4 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBA3Q8TBC4 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBA3Q8TBC4 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.9■□□□□ 0.3
UBA3Q8TBC4 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
UBA3Q8TBC4 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
UBA3Q8TBC4 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.9■□□□□ 0.3
UBA3Q8TBC4 PHKG1P2-201ENST00000457537 863 ntBASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms