Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.63■□□□□ 0.09
HIPK4Q8NE63 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.63■□□□□ 0.09
HIPK4Q8NE63 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.63■□□□□ 0.09
HIPK4Q8NE63 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
HIPK4Q8NE63 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
HIPK4Q8NE63 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
HIPK4Q8NE63 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
HIPK4Q8NE63 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
HIPK4Q8NE63 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
HIPK4Q8NE63 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HIPK4Q8NE63 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HIPK4Q8NE63 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
HIPK4Q8NE63 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
HIPK4Q8NE63 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
HIPK4Q8NE63 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HIPK4Q8NE63 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.62■□□□□ 0.09
HIPK4Q8NE63 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.62■□□□□ 0.09
HIPK4Q8NE63 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HIPK4Q8NE63 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.62■□□□□ 0.09
HIPK4Q8NE63 AC005089.1-201ENST00000619486 2241 ntBASIC15.62■□□□□ 0.09
HIPK4Q8NE63 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
HIPK4Q8NE63 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HIPK4Q8NE63 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HIPK4Q8NE63 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HIPK4Q8NE63 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.62■□□□□ 0.09
HIPK4Q8NE63 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.62■□□□□ 0.09
HIPK4Q8NE63 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.62■□□□□ 0.09
HIPK4Q8NE63 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.62■□□□□ 0.09
HIPK4Q8NE63 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HIPK4Q8NE63 AC087163.2-201ENST00000457299 853 ntBASIC15.62■□□□□ 0.09
HIPK4Q8NE63 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.62■□□□□ 0.09
HIPK4Q8NE63 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.62■□□□□ 0.09
HIPK4Q8NE63 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.62■□□□□ 0.09
HIPK4Q8NE63 AC091167.2-201ENST00000579581 588 ntBASIC15.62■□□□□ 0.09
HIPK4Q8NE63 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.62■□□□□ 0.09
HIPK4Q8NE63 AL732292.2-201ENST00000609649 430 ntBASIC15.62■□□□□ 0.09
HIPK4Q8NE63 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.62■□□□□ 0.09
HIPK4Q8NE63 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HIPK4Q8NE63 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HIPK4Q8NE63 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC15.62■□□□□ 0.09
HIPK4Q8NE63 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
HIPK4Q8NE63 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.62■□□□□ 0.09
HIPK4Q8NE63 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.62■□□□□ 0.09
HIPK4Q8NE63 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HIPK4Q8NE63 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HIPK4Q8NE63 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.62■□□□□ 0.09
HIPK4Q8NE63 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
HIPK4Q8NE63 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
HIPK4Q8NE63 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
HIPK4Q8NE63 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HIPK4Q8NE63 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
HIPK4Q8NE63 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.62■□□□□ 0.09
HIPK4Q8NE63 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC15.62■□□□□ 0.09
HIPK4Q8NE63 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.62■□□□□ 0.09
HIPK4Q8NE63 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HIPK4Q8NE63 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
HIPK4Q8NE63 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HIPK4Q8NE63 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HIPK4Q8NE63 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HIPK4Q8NE63 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.61■□□□□ 0.09
HIPK4Q8NE63 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HIPK4Q8NE63 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
HIPK4Q8NE63 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HIPK4Q8NE63 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HIPK4Q8NE63 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.61■□□□□ 0.09
HIPK4Q8NE63 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
HIPK4Q8NE63 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HIPK4Q8NE63 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HIPK4Q8NE63 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
HIPK4Q8NE63 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HIPK4Q8NE63 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
HIPK4Q8NE63 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
HIPK4Q8NE63 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HIPK4Q8NE63 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HIPK4Q8NE63 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HIPK4Q8NE63 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HIPK4Q8NE63 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.61■□□□□ 0.09
HIPK4Q8NE63 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.61■□□□□ 0.09
HIPK4Q8NE63 AC010654.1-201ENST00000615722 808 ntBASIC15.61■□□□□ 0.09
HIPK4Q8NE63 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.61■□□□□ 0.09
HIPK4Q8NE63 AC004706.3-202ENST00000621574 984 ntBASIC15.61■□□□□ 0.09
HIPK4Q8NE63 REXO1L3P-201ENST00000622202 1288 ntBASIC15.61■□□□□ 0.09
HIPK4Q8NE63 AL355877.3-201ENST00000622820 899 ntBASIC15.61■□□□□ 0.09
HIPK4Q8NE63 AC093458.2-201ENST00000623150 629 ntBASIC15.61■□□□□ 0.09
HIPK4Q8NE63 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.61■□□□□ 0.09
HIPK4Q8NE63 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HIPK4Q8NE63 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HIPK4Q8NE63 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
HIPK4Q8NE63 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HIPK4Q8NE63 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
HIPK4Q8NE63 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.61■□□□□ 0.09
HIPK4Q8NE63 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.61■□□□□ 0.09
HIPK4Q8NE63 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HIPK4Q8NE63 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HIPK4Q8NE63 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
HIPK4Q8NE63 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
HIPK4Q8NE63 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HIPK4Q8NE63 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HIPK4Q8NE63 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
HIPK4Q8NE63 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms