Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.14■□□□□ 0.01
SIMC1Q8NDZ2 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SIMC1Q8NDZ2 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SIMC1Q8NDZ2 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SIMC1Q8NDZ2 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.14■□□□□ 0.01
SIMC1Q8NDZ2 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SIMC1Q8NDZ2 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
SIMC1Q8NDZ2 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SIMC1Q8NDZ2 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.13■□□□□ 0.01
SIMC1Q8NDZ2 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SIMC1Q8NDZ2 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SIMC1Q8NDZ2 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SIMC1Q8NDZ2 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SIMC1Q8NDZ2 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
SIMC1Q8NDZ2 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SIMC1Q8NDZ2 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SIMC1Q8NDZ2 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.13■□□□□ 0.01
SIMC1Q8NDZ2 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SIMC1Q8NDZ2 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
SIMC1Q8NDZ2 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SIMC1Q8NDZ2 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SIMC1Q8NDZ2 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
SIMC1Q8NDZ2 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SIMC1Q8NDZ2 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.13■□□□□ 0.01
SIMC1Q8NDZ2 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SIMC1Q8NDZ2 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SIMC1Q8NDZ2 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SIMC1Q8NDZ2 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SIMC1Q8NDZ2 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SIMC1Q8NDZ2 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SIMC1Q8NDZ2 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.13■□□□□ 0.01
SIMC1Q8NDZ2 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.13■□□□□ 0.01
SIMC1Q8NDZ2 KRT18P32-201ENST00000424695 1287 ntBASIC15.13■□□□□ 0.01
SIMC1Q8NDZ2 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.13■□□□□ 0.01
SIMC1Q8NDZ2 CNN2P11-201ENST00000429351 262 ntBASIC15.13■□□□□ 0.01
SIMC1Q8NDZ2 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.13■□□□□ 0.01
SIMC1Q8NDZ2 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SIMC1Q8NDZ2 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.13■□□□□ 0.01
SIMC1Q8NDZ2 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SIMC1Q8NDZ2 RNA5SP410-201ENST00000516285 106 ntBASIC15.13■□□□□ 0.01
SIMC1Q8NDZ2 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.13■□□□□ 0.01
SIMC1Q8NDZ2 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.13■□□□□ 0.01
SIMC1Q8NDZ2 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
SIMC1Q8NDZ2 AC069224.1-201ENST00000566372 1715 ntBASIC15.13■□□□□ 0.01
SIMC1Q8NDZ2 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SIMC1Q8NDZ2 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.13■□□□□ 0.01
SIMC1Q8NDZ2 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.13■□□□□ 0.01
SIMC1Q8NDZ2 MIR4321-201ENST00000592276 80 ntBASIC15.13■□□□□ 0.01
SIMC1Q8NDZ2 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SIMC1Q8NDZ2 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SIMC1Q8NDZ2 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SIMC1Q8NDZ2 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SIMC1Q8NDZ2 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SIMC1Q8NDZ2 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
SIMC1Q8NDZ2 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SIMC1Q8NDZ2 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SIMC1Q8NDZ2 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SIMC1Q8NDZ2 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SIMC1Q8NDZ2 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SIMC1Q8NDZ2 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SIMC1Q8NDZ2 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SIMC1Q8NDZ2 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SIMC1Q8NDZ2 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SIMC1Q8NDZ2 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SIMC1Q8NDZ2 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SIMC1Q8NDZ2 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.12■□□□□ 0.01
SIMC1Q8NDZ2 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SIMC1Q8NDZ2 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SIMC1Q8NDZ2 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
SIMC1Q8NDZ2 AC008677.1-201ENST00000519230 1561 ntBASIC15.12■□□□□ 0.01
SIMC1Q8NDZ2 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SIMC1Q8NDZ2 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
SIMC1Q8NDZ2 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SIMC1Q8NDZ2 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
SIMC1Q8NDZ2 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SIMC1Q8NDZ2 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SIMC1Q8NDZ2 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SIMC1Q8NDZ2 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
SIMC1Q8NDZ2 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SIMC1Q8NDZ2 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
SIMC1Q8NDZ2 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SIMC1Q8NDZ2 AC254562.1-201ENST00000417586 456 ntBASIC15.12■□□□□ 0.01
SIMC1Q8NDZ2 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.12■□□□□ 0.01
SIMC1Q8NDZ2 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SIMC1Q8NDZ2 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SIMC1Q8NDZ2 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.12■□□□□ 0.01
SIMC1Q8NDZ2 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
SIMC1Q8NDZ2 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SIMC1Q8NDZ2 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SIMC1Q8NDZ2 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.12■□□□□ 0.01
SIMC1Q8NDZ2 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SIMC1Q8NDZ2 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
SIMC1Q8NDZ2 AC004835.2-201ENST00000603762 682 ntBASIC15.12■□□□□ 0.01
SIMC1Q8NDZ2 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SIMC1Q8NDZ2 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SIMC1Q8NDZ2 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SIMC1Q8NDZ2 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.12■□□□□ 0.01
SIMC1Q8NDZ2 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.12■□□□□ 0.01
SIMC1Q8NDZ2 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.12■□□□□ 0.01
SIMC1Q8NDZ2 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms