Protein–RNA interactions for Protein: Q8ND90

PNMA1, Paraneoplastic antigen Ma1, humanhuman

Predictions only

Length 353 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA1Q8ND90 AP003680.1-201ENST00000598970 3660 ntBASIC18.52■□□□□ 0.55
PNMA1Q8ND90 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.55
PNMA1Q8ND90 FLII-221ENST00000578558 2377 ntTSL 5 BASIC18.52■□□□□ 0.55
PNMA1Q8ND90 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PNMA1Q8ND90 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.55
PNMA1Q8ND90 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
PNMA1Q8ND90 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.51■□□□□ 0.55
PNMA1Q8ND90 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PNMA1Q8ND90 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
PNMA1Q8ND90 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PNMA1Q8ND90 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC18.51■□□□□ 0.55
PNMA1Q8ND90 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PNMA1Q8ND90 CALY-202ENST00000368555 783 ntTSL 2 BASIC18.51■□□□□ 0.55
PNMA1Q8ND90 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PNMA1Q8ND90 AL035633.1-201ENST00000406139 838 ntBASIC18.51■□□□□ 0.55
PNMA1Q8ND90 PIN1P1-201ENST00000412108 996 ntBASIC18.51■□□□□ 0.55
PNMA1Q8ND90 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC18.51■□□□□ 0.55
PNMA1Q8ND90 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC18.51■□□□□ 0.55
PNMA1Q8ND90 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC18.51■□□□□ 0.55
PNMA1Q8ND90 AL132655.2-201ENST00000596276 594 ntBASIC18.51■□□□□ 0.55
PNMA1Q8ND90 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC18.51■□□□□ 0.55
PNMA1Q8ND90 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PNMA1Q8ND90 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PNMA1Q8ND90 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PNMA1Q8ND90 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PNMA1Q8ND90 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC18.51■□□□□ 0.55
PNMA1Q8ND90 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.51■□□□□ 0.55
PNMA1Q8ND90 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
PNMA1Q8ND90 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PNMA1Q8ND90 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PNMA1Q8ND90 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PNMA1Q8ND90 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PNMA1Q8ND90 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
PNMA1Q8ND90 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PNMA1Q8ND90 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PNMA1Q8ND90 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.51■□□□□ 0.55
PNMA1Q8ND90 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PNMA1Q8ND90 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PNMA1Q8ND90 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PNMA1Q8ND90 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PNMA1Q8ND90 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PNMA1Q8ND90 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PNMA1Q8ND90 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
PNMA1Q8ND90 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PNMA1Q8ND90 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PNMA1Q8ND90 RAC2-202ENST00000401529 569 ntTSL 4 BASIC18.5■□□□□ 0.55
PNMA1Q8ND90 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC18.5■□□□□ 0.55
PNMA1Q8ND90 TIMM17BP1-201ENST00000545713 516 ntBASIC18.5■□□□□ 0.55
PNMA1Q8ND90 AC190387.1-201ENST00000551683 408 ntBASIC18.5■□□□□ 0.55
PNMA1Q8ND90 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC18.5■□□□□ 0.55
PNMA1Q8ND90 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC18.5■□□□□ 0.55
PNMA1Q8ND90 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
PNMA1Q8ND90 MIR4313-201ENST00000580760 101 ntBASIC18.5■□□□□ 0.55
PNMA1Q8ND90 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC18.5■□□□□ 0.55
PNMA1Q8ND90 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PNMA1Q8ND90 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
PNMA1Q8ND90 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PNMA1Q8ND90 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PNMA1Q8ND90 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18.5■□□□□ 0.55
PNMA1Q8ND90 AC007541.1-201ENST00000570282 1469 ntBASIC18.5■□□□□ 0.55
PNMA1Q8ND90 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PNMA1Q8ND90 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PNMA1Q8ND90 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PNMA1Q8ND90 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PNMA1Q8ND90 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PNMA1Q8ND90 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PNMA1Q8ND90 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PNMA1Q8ND90 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PNMA1Q8ND90 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PNMA1Q8ND90 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
PNMA1Q8ND90 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PNMA1Q8ND90 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PNMA1Q8ND90 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PNMA1Q8ND90 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC18.49■□□□□ 0.55
PNMA1Q8ND90 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PNMA1Q8ND90 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PNMA1Q8ND90 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
PNMA1Q8ND90 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PNMA1Q8ND90 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PNMA1Q8ND90 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PNMA1Q8ND90 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PNMA1Q8ND90 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
PNMA1Q8ND90 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PNMA1Q8ND90 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC18.49■□□□□ 0.55
PNMA1Q8ND90 KRT18P64-201ENST00000434946 1219 ntBASIC18.49■□□□□ 0.55
PNMA1Q8ND90 USP40-206ENST00000443711 628 ntTSL 2 BASIC18.49■□□□□ 0.55
PNMA1Q8ND90 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC18.49■□□□□ 0.55
PNMA1Q8ND90 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC18.49■□□□□ 0.55
PNMA1Q8ND90 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC18.49■□□□□ 0.55
PNMA1Q8ND90 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PNMA1Q8ND90 AC023310.3-201ENST00000557027 670 ntBASIC18.49■□□□□ 0.55
PNMA1Q8ND90 AC100756.1-201ENST00000562736 682 ntBASIC18.49■□□□□ 0.55
PNMA1Q8ND90 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
PNMA1Q8ND90 AC138749.3-201ENST00000567691 622 ntBASIC18.49■□□□□ 0.55
PNMA1Q8ND90 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC18.49■□□□□ 0.55
PNMA1Q8ND90 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.49■□□□□ 0.55
PNMA1Q8ND90 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC18.49■□□□□ 0.55
PNMA1Q8ND90 AC116165.1-201ENST00000611806 668 ntBASIC18.49■□□□□ 0.55
PNMA1Q8ND90 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PNMA1Q8ND90 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms