Protein–RNA interactions for Protein: Q8NB78

KDM1B, Lysine-specific histone demethylase 1B, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1BQ8NB78 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
KDM1BQ8NB78 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
KDM1BQ8NB78 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.31■□□□□ 0.2
KDM1BQ8NB78 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KDM1BQ8NB78 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.31■□□□□ 0.2
KDM1BQ8NB78 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.31■□□□□ 0.2
KDM1BQ8NB78 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
KDM1BQ8NB78 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.31■□□□□ 0.2
KDM1BQ8NB78 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
KDM1BQ8NB78 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.31■□□□□ 0.2
KDM1BQ8NB78 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
KDM1BQ8NB78 AC010491.1-201ENST00000563101 2797 ntBASIC16.31■□□□□ 0.2
KDM1BQ8NB78 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
KDM1BQ8NB78 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
KDM1BQ8NB78 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KDM1BQ8NB78 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.31■□□□□ 0.2
KDM1BQ8NB78 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.31■□□□□ 0.2
KDM1BQ8NB78 AC093004.1-201ENST00000508850 424 ntBASIC16.31■□□□□ 0.2
KDM1BQ8NB78 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
KDM1BQ8NB78 AC005225.4-201ENST00000557330 545 ntBASIC16.31■□□□□ 0.2
KDM1BQ8NB78 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.31■□□□□ 0.2
KDM1BQ8NB78 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.31■□□□□ 0.2
KDM1BQ8NB78 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KDM1BQ8NB78 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
KDM1BQ8NB78 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
KDM1BQ8NB78 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.31■□□□□ 0.2
KDM1BQ8NB78 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KDM1BQ8NB78 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KDM1BQ8NB78 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.3■□□□□ 0.2
KDM1BQ8NB78 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KDM1BQ8NB78 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KDM1BQ8NB78 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KDM1BQ8NB78 AC006449.6-201ENST00000612330 2296 ntBASIC16.3■□□□□ 0.2
KDM1BQ8NB78 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.3■□□□□ 0.2
KDM1BQ8NB78 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KDM1BQ8NB78 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
KDM1BQ8NB78 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.3■□□□□ 0.2
KDM1BQ8NB78 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KDM1BQ8NB78 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KDM1BQ8NB78 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.3■□□□□ 0.2
KDM1BQ8NB78 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KDM1BQ8NB78 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KDM1BQ8NB78 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
KDM1BQ8NB78 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KDM1BQ8NB78 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.3■□□□□ 0.2
KDM1BQ8NB78 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
KDM1BQ8NB78 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.3■□□□□ 0.2
KDM1BQ8NB78 MEP1AP4-201ENST00000423244 1087 ntBASIC16.3■□□□□ 0.2
KDM1BQ8NB78 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.3■□□□□ 0.2
KDM1BQ8NB78 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.3■□□□□ 0.2
KDM1BQ8NB78 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.3■□□□□ 0.2
KDM1BQ8NB78 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.3■□□□□ 0.2
KDM1BQ8NB78 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
KDM1BQ8NB78 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.3■□□□□ 0.2
KDM1BQ8NB78 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.3■□□□□ 0.2
KDM1BQ8NB78 REXO1L8P-201ENST00000604378 1897 ntBASIC16.3■□□□□ 0.2
KDM1BQ8NB78 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.3■□□□□ 0.2
KDM1BQ8NB78 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
KDM1BQ8NB78 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.3■□□□□ 0.2
KDM1BQ8NB78 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
KDM1BQ8NB78 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KDM1BQ8NB78 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KDM1BQ8NB78 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KDM1BQ8NB78 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
KDM1BQ8NB78 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KDM1BQ8NB78 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KDM1BQ8NB78 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KDM1BQ8NB78 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
KDM1BQ8NB78 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
KDM1BQ8NB78 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KDM1BQ8NB78 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.29■□□□□ 0.2
KDM1BQ8NB78 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
KDM1BQ8NB78 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
KDM1BQ8NB78 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.29■□□□□ 0.2
KDM1BQ8NB78 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KDM1BQ8NB78 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KDM1BQ8NB78 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
KDM1BQ8NB78 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
KDM1BQ8NB78 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KDM1BQ8NB78 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.29■□□□□ 0.2
KDM1BQ8NB78 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KDM1BQ8NB78 AC087499.6-201ENST00000411576 835 ntBASIC16.29■□□□□ 0.2
KDM1BQ8NB78 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.29■□□□□ 0.2
KDM1BQ8NB78 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.29■□□□□ 0.2
KDM1BQ8NB78 AC092337.1-201ENST00000568699 1129 ntBASIC16.29■□□□□ 0.2
KDM1BQ8NB78 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.29■□□□□ 0.2
KDM1BQ8NB78 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.29■□□□□ 0.2
KDM1BQ8NB78 AC074044.1-201ENST00000609673 707 ntBASIC16.29■□□□□ 0.2
KDM1BQ8NB78 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.29■□□□□ 0.2
KDM1BQ8NB78 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.29■□□□□ 0.2
KDM1BQ8NB78 AC025048.6-201ENST00000634326 1161 ntBASIC16.29■□□□□ 0.2
KDM1BQ8NB78 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KDM1BQ8NB78 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.29■□□□□ 0.2
KDM1BQ8NB78 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
KDM1BQ8NB78 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
KDM1BQ8NB78 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KDM1BQ8NB78 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KDM1BQ8NB78 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
KDM1BQ8NB78 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.29■□□□□ 0.2
KDM1BQ8NB78 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms