Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC33Q8N5R6 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC33Q8N5R6 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CCDC33Q8N5R6 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC33Q8N5R6 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC33Q8N5R6 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC33Q8N5R6 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC33Q8N5R6 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CCDC33Q8N5R6 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC33Q8N5R6 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC33Q8N5R6 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC33Q8N5R6 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC33Q8N5R6 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC33Q8N5R6 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC33Q8N5R6 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC33Q8N5R6 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC33Q8N5R6 AC103702.1-201ENST00000548801 2630 ntBASIC16.83■□□□□ 0.29
CCDC33Q8N5R6 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CCDC33Q8N5R6 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
CCDC33Q8N5R6 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
CCDC33Q8N5R6 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.29
CCDC33Q8N5R6 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC33Q8N5R6 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC33Q8N5R6 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC33Q8N5R6 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC33Q8N5R6 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.83■□□□□ 0.28
CCDC33Q8N5R6 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC33Q8N5R6 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.83■□□□□ 0.28
CCDC33Q8N5R6 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC33Q8N5R6 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
CCDC33Q8N5R6 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.83■□□□□ 0.28
CCDC33Q8N5R6 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.83■□□□□ 0.28
CCDC33Q8N5R6 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC33Q8N5R6 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.83■□□□□ 0.28
CCDC33Q8N5R6 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.83■□□□□ 0.28
CCDC33Q8N5R6 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.83■□□□□ 0.28
CCDC33Q8N5R6 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.83■□□□□ 0.28
CCDC33Q8N5R6 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC33Q8N5R6 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC33Q8N5R6 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.83■□□□□ 0.28
CCDC33Q8N5R6 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.83■□□□□ 0.28
CCDC33Q8N5R6 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
CCDC33Q8N5R6 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC33Q8N5R6 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC33Q8N5R6 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC33Q8N5R6 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.83■□□□□ 0.28
CCDC33Q8N5R6 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC33Q8N5R6 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC33Q8N5R6 AL603832.2-201ENST00000566195 2125 ntBASIC16.82■□□□□ 0.28
CCDC33Q8N5R6 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC33Q8N5R6 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC33Q8N5R6 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC33Q8N5R6 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC33Q8N5R6 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC33Q8N5R6 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC33Q8N5R6 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.82■□□□□ 0.28
CCDC33Q8N5R6 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC33Q8N5R6 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.82■□□□□ 0.28
CCDC33Q8N5R6 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC33Q8N5R6 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.82■□□□□ 0.28
CCDC33Q8N5R6 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC33Q8N5R6 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CCDC33Q8N5R6 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC33Q8N5R6 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC33Q8N5R6 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.82■□□□□ 0.28
CCDC33Q8N5R6 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC33Q8N5R6 PRYP6-201ENST00000514804 343 ntBASIC16.82■□□□□ 0.28
CCDC33Q8N5R6 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.82■□□□□ 0.28
CCDC33Q8N5R6 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CCDC33Q8N5R6 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC33Q8N5R6 AL138828.2-201ENST00000615812 383 ntBASIC16.82■□□□□ 0.28
CCDC33Q8N5R6 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.82■□□□□ 0.28
CCDC33Q8N5R6 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CCDC33Q8N5R6 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC33Q8N5R6 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC33Q8N5R6 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC33Q8N5R6 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
CCDC33Q8N5R6 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC33Q8N5R6 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.81■□□□□ 0.28
CCDC33Q8N5R6 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC33Q8N5R6 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC33Q8N5R6 AL592424.1-201ENST00000563624 1536 ntBASIC16.81■□□□□ 0.28
CCDC33Q8N5R6 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC33Q8N5R6 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CCDC33Q8N5R6 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CCDC33Q8N5R6 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC33Q8N5R6 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC33Q8N5R6 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC33Q8N5R6 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC33Q8N5R6 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC33Q8N5R6 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC33Q8N5R6 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.81■□□□□ 0.28
CCDC33Q8N5R6 TSSK5P-201ENST00000423978 907 ntBASIC16.81■□□□□ 0.28
CCDC33Q8N5R6 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.81■□□□□ 0.28
CCDC33Q8N5R6 CRB3P1-201ENST00000449338 276 ntBASIC16.81■□□□□ 0.28
CCDC33Q8N5R6 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.81■□□□□ 0.28
CCDC33Q8N5R6 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.81■□□□□ 0.28
CCDC33Q8N5R6 AC073389.1-201ENST00000595595 795 ntBASIC16.81■□□□□ 0.28
CCDC33Q8N5R6 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.81■□□□□ 0.28
CCDC33Q8N5R6 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms