Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NPAS4Q8IUM7 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NPAS4Q8IUM7 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
NPAS4Q8IUM7 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NPAS4Q8IUM7 AGER-214ENST00000538695 487 ntTSL 2 BASIC16.98■□□□□ 0.31
NPAS4Q8IUM7 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC16.98■□□□□ 0.31
NPAS4Q8IUM7 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.98■□□□□ 0.31
NPAS4Q8IUM7 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.98■□□□□ 0.31
NPAS4Q8IUM7 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NPAS4Q8IUM7 AC010328.2-201ENST00000597698 1111 ntBASIC16.98■□□□□ 0.31
NPAS4Q8IUM7 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NPAS4Q8IUM7 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NPAS4Q8IUM7 SNX12-206ENST00000622259 661 ntTSL 5 BASIC16.98■□□□□ 0.31
NPAS4Q8IUM7 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC16.98■□□□□ 0.31
NPAS4Q8IUM7 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.98■□□□□ 0.31
NPAS4Q8IUM7 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.98■□□□□ 0.31
NPAS4Q8IUM7 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.98■□□□□ 0.31
NPAS4Q8IUM7 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NPAS4Q8IUM7 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.98■□□□□ 0.31
NPAS4Q8IUM7 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NPAS4Q8IUM7 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.98■□□□□ 0.31
NPAS4Q8IUM7 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NPAS4Q8IUM7 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NPAS4Q8IUM7 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.97■□□□□ 0.31
NPAS4Q8IUM7 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.97■□□□□ 0.31
NPAS4Q8IUM7 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NPAS4Q8IUM7 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NPAS4Q8IUM7 DRD5P1-201ENST00000456605 1438 ntBASIC16.97■□□□□ 0.31
NPAS4Q8IUM7 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NPAS4Q8IUM7 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.97■□□□□ 0.31
NPAS4Q8IUM7 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
NPAS4Q8IUM7 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NPAS4Q8IUM7 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
NPAS4Q8IUM7 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.97■□□□□ 0.31
NPAS4Q8IUM7 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.97■□□□□ 0.31
NPAS4Q8IUM7 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.97■□□□□ 0.31
NPAS4Q8IUM7 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC16.97■□□□□ 0.31
NPAS4Q8IUM7 C2orf27AP3-201ENST00000434123 579 ntBASIC16.97■□□□□ 0.31
NPAS4Q8IUM7 PFN1P12-201ENST00000455938 534 ntBASIC16.97■□□□□ 0.31
NPAS4Q8IUM7 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NPAS4Q8IUM7 CD74-212ENST00000524315 584 ntTSL 5 BASIC16.97■□□□□ 0.31
NPAS4Q8IUM7 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
NPAS4Q8IUM7 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NPAS4Q8IUM7 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16.97■□□□□ 0.31
NPAS4Q8IUM7 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.97■□□□□ 0.31
NPAS4Q8IUM7 AL354718.3-201ENST00000616414 581 ntBASIC16.97■□□□□ 0.31
NPAS4Q8IUM7 CR382287.1-201ENST00000623954 586 ntBASIC16.97■□□□□ 0.31
NPAS4Q8IUM7 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.97■□□□□ 0.31
NPAS4Q8IUM7 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NPAS4Q8IUM7 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
NPAS4Q8IUM7 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NPAS4Q8IUM7 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
NPAS4Q8IUM7 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NPAS4Q8IUM7 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NPAS4Q8IUM7 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NPAS4Q8IUM7 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NPAS4Q8IUM7 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NPAS4Q8IUM7 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
NPAS4Q8IUM7 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NPAS4Q8IUM7 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NPAS4Q8IUM7 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
NPAS4Q8IUM7 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
NPAS4Q8IUM7 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NPAS4Q8IUM7 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NPAS4Q8IUM7 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NPAS4Q8IUM7 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
NPAS4Q8IUM7 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.96■□□□□ 0.31
NPAS4Q8IUM7 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.96■□□□□ 0.31
NPAS4Q8IUM7 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NPAS4Q8IUM7 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
NPAS4Q8IUM7 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
NPAS4Q8IUM7 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NPAS4Q8IUM7 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NPAS4Q8IUM7 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
NPAS4Q8IUM7 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
NPAS4Q8IUM7 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
NPAS4Q8IUM7 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NPAS4Q8IUM7 AC026954.1-201ENST00000429771 1293 ntBASIC16.96■□□□□ 0.31
NPAS4Q8IUM7 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC16.96■□□□□ 0.31
NPAS4Q8IUM7 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NPAS4Q8IUM7 AC108725.1-201ENST00000495472 409 ntBASIC16.96■□□□□ 0.31
NPAS4Q8IUM7 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16.96■□□□□ 0.31
NPAS4Q8IUM7 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC16.96■□□□□ 0.31
NPAS4Q8IUM7 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.96■□□□□ 0.31
NPAS4Q8IUM7 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC16.96■□□□□ 0.31
NPAS4Q8IUM7 DERL2-202ENST00000570848 657 ntTSL 5 BASIC16.96■□□□□ 0.31
NPAS4Q8IUM7 AC107373.2-201ENST00000607735 490 ntBASIC16.96■□□□□ 0.31
NPAS4Q8IUM7 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC16.96■□□□□ 0.31
NPAS4Q8IUM7 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NPAS4Q8IUM7 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC16.96■□□□□ 0.31
NPAS4Q8IUM7 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NPAS4Q8IUM7 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.96■□□□□ 0.31
NPAS4Q8IUM7 AC006449.6-201ENST00000612330 2296 ntBASIC16.96■□□□□ 0.31
NPAS4Q8IUM7 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
NPAS4Q8IUM7 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
NPAS4Q8IUM7 FLJ38576-201ENST00000623820 2459 ntBASIC16.96■□□□□ 0.31
NPAS4Q8IUM7 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
NPAS4Q8IUM7 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.96■□□□□ 0.31
NPAS4Q8IUM7 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
NPAS4Q8IUM7 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms