Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.31□□□□□ -0.12
LRRC28Q86X40 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.31□□□□□ -0.12
LRRC28Q86X40 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.31□□□□□ -0.12
LRRC28Q86X40 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.31□□□□□ -0.12
LRRC28Q86X40 OR7E47P-204ENST00000575924 449 ntBASIC14.31□□□□□ -0.12
LRRC28Q86X40 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.31□□□□□ -0.12
LRRC28Q86X40 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.31□□□□□ -0.12
LRRC28Q86X40 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.31□□□□□ -0.12
LRRC28Q86X40 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.31□□□□□ -0.12
LRRC28Q86X40 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.31□□□□□ -0.12
LRRC28Q86X40 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LRRC28Q86X40 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
LRRC28Q86X40 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LRRC28Q86X40 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRRC28Q86X40 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.31□□□□□ -0.12
LRRC28Q86X40 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
LRRC28Q86X40 AC005089.1-201ENST00000619486 2241 ntBASIC14.31□□□□□ -0.12
LRRC28Q86X40 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
LRRC28Q86X40 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.31□□□□□ -0.12
LRRC28Q86X40 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRRC28Q86X40 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LRRC28Q86X40 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
LRRC28Q86X40 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LRRC28Q86X40 AC106881.1-201ENST00000605849 3329 ntBASIC14.31□□□□□ -0.12
LRRC28Q86X40 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LRRC28Q86X40 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.31□□□□□ -0.12
LRRC28Q86X40 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LRRC28Q86X40 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LRRC28Q86X40 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.31□□□□□ -0.12
LRRC28Q86X40 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
LRRC28Q86X40 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LRRC28Q86X40 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
LRRC28Q86X40 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.3□□□□□ -0.12
LRRC28Q86X40 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRRC28Q86X40 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRRC28Q86X40 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRRC28Q86X40 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRRC28Q86X40 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.3□□□□□ -0.12
LRRC28Q86X40 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
LRRC28Q86X40 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRRC28Q86X40 TCAF2P1-201ENST00000291129 2421 ntBASIC14.3□□□□□ -0.12
LRRC28Q86X40 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRRC28Q86X40 AC087481.3-201ENST00000602886 1894 ntBASIC14.3□□□□□ -0.12
LRRC28Q86X40 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.3□□□□□ -0.12
LRRC28Q86X40 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.3□□□□□ -0.12
LRRC28Q86X40 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.3□□□□□ -0.12
LRRC28Q86X40 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
LRRC28Q86X40 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.3□□□□□ -0.12
LRRC28Q86X40 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.3□□□□□ -0.12
LRRC28Q86X40 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRRC28Q86X40 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.3□□□□□ -0.12
LRRC28Q86X40 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.3□□□□□ -0.12
LRRC28Q86X40 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.3□□□□□ -0.12
LRRC28Q86X40 AC023511.2-201ENST00000618803 211 ntBASIC14.3□□□□□ -0.12
LRRC28Q86X40 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
LRRC28Q86X40 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LRRC28Q86X40 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRRC28Q86X40 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRRC28Q86X40 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.3□□□□□ -0.12
LRRC28Q86X40 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LRRC28Q86X40 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRRC28Q86X40 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LRRC28Q86X40 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.3□□□□□ -0.12
LRRC28Q86X40 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.3□□□□□ -0.12
LRRC28Q86X40 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.3□□□□□ -0.12
LRRC28Q86X40 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.3□□□□□ -0.12
LRRC28Q86X40 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
LRRC28Q86X40 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRRC28Q86X40 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LRRC28Q86X40 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRRC28Q86X40 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.3□□□□□ -0.12
LRRC28Q86X40 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRRC28Q86X40 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
LRRC28Q86X40 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRRC28Q86X40 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRRC28Q86X40 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.29□□□□□ -0.12
LRRC28Q86X40 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.29□□□□□ -0.12
LRRC28Q86X40 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRRC28Q86X40 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.29□□□□□ -0.12
LRRC28Q86X40 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
LRRC28Q86X40 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRRC28Q86X40 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LRRC28Q86X40 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRRC28Q86X40 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRRC28Q86X40 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LRRC28Q86X40 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
LRRC28Q86X40 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
LRRC28Q86X40 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRRC28Q86X40 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
LRRC28Q86X40 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRRC28Q86X40 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRRC28Q86X40 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
LRRC28Q86X40 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
LRRC28Q86X40 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRRC28Q86X40 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.29□□□□□ -0.12
LRRC28Q86X40 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.29□□□□□ -0.12
LRRC28Q86X40 AC096734.2-201ENST00000562054 433 ntBASIC14.29□□□□□ -0.12
LRRC28Q86X40 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.29□□□□□ -0.12
LRRC28Q86X40 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRRC28Q86X40 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms