Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.6■□□□□ 0.25
CCDC25Q86WR0 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC25Q86WR0 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC25Q86WR0 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC25Q86WR0 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
CCDC25Q86WR0 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC25Q86WR0 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.6■□□□□ 0.25
CCDC25Q86WR0 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CCDC25Q86WR0 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC25Q86WR0 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC25Q86WR0 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC25Q86WR0 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
CCDC25Q86WR0 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
CCDC25Q86WR0 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC25Q86WR0 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC25Q86WR0 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CCDC25Q86WR0 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.59■□□□□ 0.25
CCDC25Q86WR0 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC25Q86WR0 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.59■□□□□ 0.25
CCDC25Q86WR0 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC25Q86WR0 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC25Q86WR0 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC25Q86WR0 TSPY19P-201ENST00000418461 509 ntBASIC16.59■□□□□ 0.25
CCDC25Q86WR0 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC25Q86WR0 TSPY18P-201ENST00000441642 509 ntBASIC16.59■□□□□ 0.25
CCDC25Q86WR0 HCG4P8-203ENST00000443049 980 ntBASIC16.59■□□□□ 0.25
CCDC25Q86WR0 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.59■□□□□ 0.25
CCDC25Q86WR0 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.59■□□□□ 0.25
CCDC25Q86WR0 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC25Q86WR0 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.59■□□□□ 0.25
CCDC25Q86WR0 AF238378.1-201ENST00000526806 358 ntBASIC16.59■□□□□ 0.25
CCDC25Q86WR0 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC25Q86WR0 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CCDC25Q86WR0 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.59■□□□□ 0.25
CCDC25Q86WR0 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC25Q86WR0 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC25Q86WR0 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC25Q86WR0 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC25Q86WR0 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC25Q86WR0 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC25Q86WR0 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC25Q86WR0 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC25Q86WR0 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC16.59■□□□□ 0.25
CCDC25Q86WR0 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC25Q86WR0 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC25Q86WR0 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CCDC25Q86WR0 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CCDC25Q86WR0 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CCDC25Q86WR0 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CCDC25Q86WR0 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.58■□□□□ 0.25
CCDC25Q86WR0 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CCDC25Q86WR0 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CCDC25Q86WR0 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CCDC25Q86WR0 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CCDC25Q86WR0 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
CCDC25Q86WR0 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CCDC25Q86WR0 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CCDC25Q86WR0 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CCDC25Q86WR0 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.58■□□□□ 0.24
CCDC25Q86WR0 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.58■□□□□ 0.24
CCDC25Q86WR0 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC25Q86WR0 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC25Q86WR0 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC25Q86WR0 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.58■□□□□ 0.24
CCDC25Q86WR0 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC25Q86WR0 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC25Q86WR0 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.58■□□□□ 0.24
CCDC25Q86WR0 PRELID1P1-202ENST00000567272 903 ntBASIC16.58■□□□□ 0.24
CCDC25Q86WR0 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.58■□□□□ 0.24
CCDC25Q86WR0 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.58■□□□□ 0.24
CCDC25Q86WR0 ACTL9-202ENST00000612068 1252 ntBASIC16.58■□□□□ 0.24
CCDC25Q86WR0 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CCDC25Q86WR0 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.58■□□□□ 0.24
CCDC25Q86WR0 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC25Q86WR0 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC25Q86WR0 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CCDC25Q86WR0 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC25Q86WR0 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
CCDC25Q86WR0 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC25Q86WR0 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CCDC25Q86WR0 AL009178.2-201ENST00000597278 2719 ntBASIC16.58■□□□□ 0.24
CCDC25Q86WR0 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC25Q86WR0 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.58■□□□□ 0.24
CCDC25Q86WR0 AC106881.1-201ENST00000605849 3329 ntBASIC16.58■□□□□ 0.24
CCDC25Q86WR0 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC25Q86WR0 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC25Q86WR0 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC25Q86WR0 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
CCDC25Q86WR0 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
CCDC25Q86WR0 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC25Q86WR0 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.57■□□□□ 0.24
CCDC25Q86WR0 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC25Q86WR0 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC25Q86WR0 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC25Q86WR0 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC25Q86WR0 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CCDC25Q86WR0 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC25Q86WR0 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.57■□□□□ 0.24
CCDC25Q86WR0 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC25Q86WR0 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms