Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TUBA1AQ71U36 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TUBA1AQ71U36 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TUBA1AQ71U36 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TUBA1AQ71U36 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.85□□□□□ -0.03
TUBA1AQ71U36 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.85□□□□□ -0.03
TUBA1AQ71U36 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TUBA1AQ71U36 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TUBA1AQ71U36 AL359258.3-201ENST00000622910 2331 ntBASIC14.85□□□□□ -0.03
TUBA1AQ71U36 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
TUBA1AQ71U36 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TUBA1AQ71U36 PMS2P1-201ENST00000431037 1228 ntBASIC14.85□□□□□ -0.03
TUBA1AQ71U36 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.85□□□□□ -0.03
TUBA1AQ71U36 PRSS29P-201ENST00000440800 595 ntBASIC14.85□□□□□ -0.03
TUBA1AQ71U36 HCG4B-203ENST00000450128 991 ntBASIC14.85□□□□□ -0.03
TUBA1AQ71U36 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.85□□□□□ -0.03
TUBA1AQ71U36 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.85□□□□□ -0.03
TUBA1AQ71U36 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.85□□□□□ -0.03
TUBA1AQ71U36 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TUBA1AQ71U36 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.85□□□□□ -0.03
TUBA1AQ71U36 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TUBA1AQ71U36 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
TUBA1AQ71U36 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.85□□□□□ -0.03
TUBA1AQ71U36 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TUBA1AQ71U36 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TUBA1AQ71U36 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TUBA1AQ71U36 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.85□□□□□ -0.03
TUBA1AQ71U36 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TUBA1AQ71U36 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.85□□□□□ -0.03
TUBA1AQ71U36 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.85□□□□□ -0.03
TUBA1AQ71U36 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TUBA1AQ71U36 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.85□□□□□ -0.03
TUBA1AQ71U36 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TUBA1AQ71U36 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
TUBA1AQ71U36 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TUBA1AQ71U36 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.85□□□□□ -0.03
TUBA1AQ71U36 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.85□□□□□ -0.03
TUBA1AQ71U36 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
TUBA1AQ71U36 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TUBA1AQ71U36 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TUBA1AQ71U36 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TUBA1AQ71U36 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TUBA1AQ71U36 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TUBA1AQ71U36 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
TUBA1AQ71U36 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TUBA1AQ71U36 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.84□□□□□ -0.03
TUBA1AQ71U36 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TUBA1AQ71U36 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.84□□□□□ -0.03
TUBA1AQ71U36 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TUBA1AQ71U36 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TUBA1AQ71U36 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TUBA1AQ71U36 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.84□□□□□ -0.03
TUBA1AQ71U36 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.84□□□□□ -0.03
TUBA1AQ71U36 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.84□□□□□ -0.03
TUBA1AQ71U36 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
TUBA1AQ71U36 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
TUBA1AQ71U36 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TUBA1AQ71U36 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TUBA1AQ71U36 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TUBA1AQ71U36 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
TUBA1AQ71U36 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.84□□□□□ -0.03
TUBA1AQ71U36 AC023274.1-201ENST00000418278 595 ntBASIC14.84□□□□□ -0.03
TUBA1AQ71U36 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.84□□□□□ -0.03
TUBA1AQ71U36 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.84□□□□□ -0.03
TUBA1AQ71U36 RNA5SP416-201ENST00000516838 111 ntBASIC14.84□□□□□ -0.03
TUBA1AQ71U36 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.84□□□□□ -0.03
TUBA1AQ71U36 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.84□□□□□ -0.03
TUBA1AQ71U36 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.84□□□□□ -0.03
TUBA1AQ71U36 DUX4L17-201ENST00000557360 1267 ntBASIC14.84□□□□□ -0.03
TUBA1AQ71U36 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.84□□□□□ -0.03
TUBA1AQ71U36 AC010507.1-201ENST00000633895 436 ntBASIC14.84□□□□□ -0.03
TUBA1AQ71U36 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TUBA1AQ71U36 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
TUBA1AQ71U36 AC136621.1-201ENST00000624017 2304 ntBASIC14.84□□□□□ -0.03
TUBA1AQ71U36 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TUBA1AQ71U36 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.84□□□□□ -0.03
TUBA1AQ71U36 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.84□□□□□ -0.03
TUBA1AQ71U36 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TUBA1AQ71U36 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.84□□□□□ -0.03
TUBA1AQ71U36 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.84□□□□□ -0.03
TUBA1AQ71U36 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TUBA1AQ71U36 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TUBA1AQ71U36 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TUBA1AQ71U36 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TUBA1AQ71U36 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TUBA1AQ71U36 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TUBA1AQ71U36 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TUBA1AQ71U36 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
TUBA1AQ71U36 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TUBA1AQ71U36 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.83□□□□□ -0.03
TUBA1AQ71U36 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TUBA1AQ71U36 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
TUBA1AQ71U36 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
TUBA1AQ71U36 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
TUBA1AQ71U36 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TUBA1AQ71U36 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TUBA1AQ71U36 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.83□□□□□ -0.04
TUBA1AQ71U36 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.83□□□□□ -0.04
TUBA1AQ71U36 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TUBA1AQ71U36 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms