Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.7■□□□□ 0.26
RFWD3Q6PCD5 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFWD3Q6PCD5 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.7■□□□□ 0.26
RFWD3Q6PCD5 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
RFWD3Q6PCD5 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.7■□□□□ 0.26
RFWD3Q6PCD5 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.7■□□□□ 0.26
RFWD3Q6PCD5 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.7■□□□□ 0.26
RFWD3Q6PCD5 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RFWD3Q6PCD5 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
RFWD3Q6PCD5 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFWD3Q6PCD5 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFWD3Q6PCD5 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.7■□□□□ 0.26
RFWD3Q6PCD5 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFWD3Q6PCD5 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.7■□□□□ 0.26
RFWD3Q6PCD5 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.7■□□□□ 0.26
RFWD3Q6PCD5 AL512638.1-201ENST00000457493 794 ntBASIC16.7■□□□□ 0.26
RFWD3Q6PCD5 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.7■□□□□ 0.26
RFWD3Q6PCD5 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RFWD3Q6PCD5 AL079307.3-201ENST00000556114 283 ntBASIC16.7■□□□□ 0.26
RFWD3Q6PCD5 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RFWD3Q6PCD5 AC092364.2-202ENST00000597012 1073 ntBASIC16.7■□□□□ 0.26
RFWD3Q6PCD5 TEX28P1-201ENST00000613479 1221 ntBASIC16.7■□□□□ 0.26
RFWD3Q6PCD5 TEX28P2-201ENST00000617764 1221 ntBASIC16.7■□□□□ 0.26
RFWD3Q6PCD5 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.7■□□□□ 0.26
RFWD3Q6PCD5 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
RFWD3Q6PCD5 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
RFWD3Q6PCD5 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.7■□□□□ 0.26
RFWD3Q6PCD5 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
RFWD3Q6PCD5 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
RFWD3Q6PCD5 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.7■□□□□ 0.26
RFWD3Q6PCD5 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFWD3Q6PCD5 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFWD3Q6PCD5 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RFWD3Q6PCD5 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFWD3Q6PCD5 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RFWD3Q6PCD5 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.69■□□□□ 0.26
RFWD3Q6PCD5 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFWD3Q6PCD5 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
RFWD3Q6PCD5 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
RFWD3Q6PCD5 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
RFWD3Q6PCD5 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.69■□□□□ 0.26
RFWD3Q6PCD5 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFWD3Q6PCD5 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RFWD3Q6PCD5 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFWD3Q6PCD5 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.69■□□□□ 0.26
RFWD3Q6PCD5 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RFWD3Q6PCD5 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.69■□□□□ 0.26
RFWD3Q6PCD5 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.69■□□□□ 0.26
RFWD3Q6PCD5 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RFWD3Q6PCD5 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
RFWD3Q6PCD5 TSSK5P-201ENST00000423978 907 ntBASIC16.69■□□□□ 0.26
RFWD3Q6PCD5 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.69■□□□□ 0.26
RFWD3Q6PCD5 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.69■□□□□ 0.26
RFWD3Q6PCD5 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.69■□□□□ 0.26
RFWD3Q6PCD5 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.69■□□□□ 0.26
RFWD3Q6PCD5 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.69■□□□□ 0.26
RFWD3Q6PCD5 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
RFWD3Q6PCD5 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.69■□□□□ 0.26
RFWD3Q6PCD5 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.69■□□□□ 0.26
RFWD3Q6PCD5 AL136982.4-201ENST00000437689 1740 ntBASIC16.69■□□□□ 0.26
RFWD3Q6PCD5 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFWD3Q6PCD5 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFWD3Q6PCD5 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.69■□□□□ 0.26
RFWD3Q6PCD5 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFWD3Q6PCD5 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
RFWD3Q6PCD5 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFWD3Q6PCD5 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.69■□□□□ 0.26
RFWD3Q6PCD5 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
RFWD3Q6PCD5 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFWD3Q6PCD5 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.69■□□□□ 0.26
RFWD3Q6PCD5 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.68■□□□□ 0.26
RFWD3Q6PCD5 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
RFWD3Q6PCD5 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RFWD3Q6PCD5 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RFWD3Q6PCD5 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.68■□□□□ 0.26
RFWD3Q6PCD5 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RFWD3Q6PCD5 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFWD3Q6PCD5 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFWD3Q6PCD5 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFWD3Q6PCD5 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RFWD3Q6PCD5 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
RFWD3Q6PCD5 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFWD3Q6PCD5 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFWD3Q6PCD5 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.68■□□□□ 0.26
RFWD3Q6PCD5 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.68■□□□□ 0.26
RFWD3Q6PCD5 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.68■□□□□ 0.26
RFWD3Q6PCD5 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
RFWD3Q6PCD5 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.68■□□□□ 0.26
RFWD3Q6PCD5 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
RFWD3Q6PCD5 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.68■□□□□ 0.26
RFWD3Q6PCD5 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RFWD3Q6PCD5 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFWD3Q6PCD5 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFWD3Q6PCD5 AL080243.2-201ENST00000418783 582 ntBASIC16.68■□□□□ 0.26
RFWD3Q6PCD5 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RFWD3Q6PCD5 AC004890.2-204ENST00000481968 304 ntBASIC16.68■□□□□ 0.26
RFWD3Q6PCD5 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.68■□□□□ 0.26
RFWD3Q6PCD5 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFWD3Q6PCD5 AC026979.3-201ENST00000607315 403 ntBASIC16.68■□□□□ 0.26
RFWD3Q6PCD5 AJ011932.1-201ENST00000621707 465 ntBASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms