Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC13.01□□□□□ -0.33
CCDC144NLQ6NUI1 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC144NLQ6NUI1 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC144NLQ6NUI1 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC144NLQ6NUI1 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
CCDC144NLQ6NUI1 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC144NLQ6NUI1 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC144NLQ6NUI1 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC144NLQ6NUI1 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.01□□□□□ -0.33
CCDC144NLQ6NUI1 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC13.01□□□□□ -0.33
CCDC144NLQ6NUI1 MTND6P24-201ENST00000440466 518 ntBASIC13.01□□□□□ -0.33
CCDC144NLQ6NUI1 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC144NLQ6NUI1 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC144NLQ6NUI1 SERBP1P3-201ENST00000459980 809 ntBASIC13.01□□□□□ -0.33
CCDC144NLQ6NUI1 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.01□□□□□ -0.33
CCDC144NLQ6NUI1 AC069120.2-201ENST00000524091 540 ntBASIC13.01□□□□□ -0.33
CCDC144NLQ6NUI1 AC140878.1-201ENST00000565277 250 ntBASIC13.01□□□□□ -0.33
CCDC144NLQ6NUI1 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.01□□□□□ -0.33
CCDC144NLQ6NUI1 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.01□□□□□ -0.33
CCDC144NLQ6NUI1 AC093028.1-201ENST00000622998 982 ntBASIC13.01□□□□□ -0.33
CCDC144NLQ6NUI1 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC13.01□□□□□ -0.33
CCDC144NLQ6NUI1 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.01□□□□□ -0.33
CCDC144NLQ6NUI1 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC144NLQ6NUI1 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC13.01□□□□□ -0.33
CCDC144NLQ6NUI1 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
CCDC144NLQ6NUI1 AL691432.1-201ENST00000596308 1422 ntBASIC13.01□□□□□ -0.33
CCDC144NLQ6NUI1 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC144NLQ6NUI1 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.01□□□□□ -0.33
CCDC144NLQ6NUI1 AC008677.1-201ENST00000519230 1561 ntBASIC13.01□□□□□ -0.33
CCDC144NLQ6NUI1 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC144NLQ6NUI1 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC144NLQ6NUI1 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC144NLQ6NUI1 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC13.01□□□□□ -0.33
CCDC144NLQ6NUI1 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC13.01□□□□□ -0.33
CCDC144NLQ6NUI1 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC144NLQ6NUI1 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC144NLQ6NUI1 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC144NLQ6NUI1 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC13.01□□□□□ -0.33
CCDC144NLQ6NUI1 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.01□□□□□ -0.33
CCDC144NLQ6NUI1 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.01□□□□□ -0.33
CCDC144NLQ6NUI1 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC144NLQ6NUI1 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC144NLQ6NUI1 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC144NLQ6NUI1 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC144NLQ6NUI1 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.01□□□□□ -0.33
CCDC144NLQ6NUI1 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCDC144NLQ6NUI1 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCDC144NLQ6NUI1 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC144NLQ6NUI1 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CCDC144NLQ6NUI1 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC13□□□□□ -0.33
CCDC144NLQ6NUI1 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC144NLQ6NUI1 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CCDC144NLQ6NUI1 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC144NLQ6NUI1 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC144NLQ6NUI1 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC144NLQ6NUI1 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13□□□□□ -0.33
CCDC144NLQ6NUI1 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC144NLQ6NUI1 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13□□□□□ -0.33
CCDC144NLQ6NUI1 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
CCDC144NLQ6NUI1 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13□□□□□ -0.33
CCDC144NLQ6NUI1 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC144NLQ6NUI1 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC13□□□□□ -0.33
CCDC144NLQ6NUI1 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC144NLQ6NUI1 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC144NLQ6NUI1 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC144NLQ6NUI1 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC144NLQ6NUI1 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13□□□□□ -0.33
CCDC144NLQ6NUI1 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC144NLQ6NUI1 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCDC144NLQ6NUI1 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC144NLQ6NUI1 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCDC144NLQ6NUI1 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13□□□□□ -0.33
CCDC144NLQ6NUI1 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13□□□□□ -0.33
CCDC144NLQ6NUI1 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13□□□□□ -0.33
CCDC144NLQ6NUI1 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC13□□□□□ -0.33
CCDC144NLQ6NUI1 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCDC144NLQ6NUI1 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13□□□□□ -0.33
CCDC144NLQ6NUI1 RN7SL828P-201ENST00000607615 303 ntBASIC13□□□□□ -0.33
CCDC144NLQ6NUI1 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCDC144NLQ6NUI1 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13□□□□□ -0.33
CCDC144NLQ6NUI1 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC13□□□□□ -0.33
CCDC144NLQ6NUI1 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC144NLQ6NUI1 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
CCDC144NLQ6NUI1 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC144NLQ6NUI1 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
CCDC144NLQ6NUI1 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC144NLQ6NUI1 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC144NLQ6NUI1 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC144NLQ6NUI1 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC144NLQ6NUI1 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC13□□□□□ -0.33
CCDC144NLQ6NUI1 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC13□□□□□ -0.33
CCDC144NLQ6NUI1 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC144NLQ6NUI1 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC144NLQ6NUI1 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
CCDC144NLQ6NUI1 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCDC144NLQ6NUI1 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC144NLQ6NUI1 AC011477.6-201ENST00000604980 1927 ntBASIC13□□□□□ -0.33
CCDC144NLQ6NUI1 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC144NLQ6NUI1 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC144NLQ6NUI1 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms