Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LPCAT4Q643R3 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.13■□□□□ 0.01
LPCAT4Q643R3 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LPCAT4Q643R3 TSPY22P-201ENST00000427496 604 ntBASIC15.13■□□□□ 0.01
LPCAT4Q643R3 AC246785.2-201ENST00000432512 513 ntBASIC15.13■□□□□ 0.01
LPCAT4Q643R3 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LPCAT4Q643R3 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
LPCAT4Q643R3 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.13■□□□□ 0.01
LPCAT4Q643R3 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC15.13■□□□□ 0.01
LPCAT4Q643R3 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.13■□□□□ 0.01
LPCAT4Q643R3 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LPCAT4Q643R3 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.13■□□□□ 0.01
LPCAT4Q643R3 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.13■□□□□ 0.01
LPCAT4Q643R3 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.13■□□□□ 0.01
LPCAT4Q643R3 AC139887.4-201ENST00000607877 719 ntBASIC15.13■□□□□ 0.01
LPCAT4Q643R3 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LPCAT4Q643R3 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.13■□□□□ 0.01
LPCAT4Q643R3 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LPCAT4Q643R3 INTS4P1-201ENST00000438455 1935 ntBASIC15.13■□□□□ 0.01
LPCAT4Q643R3 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LPCAT4Q643R3 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
LPCAT4Q643R3 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LPCAT4Q643R3 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
LPCAT4Q643R3 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LPCAT4Q643R3 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LPCAT4Q643R3 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.13■□□□□ 0.01
LPCAT4Q643R3 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LPCAT4Q643R3 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LPCAT4Q643R3 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LPCAT4Q643R3 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC15.13■□□□□ 0.01
LPCAT4Q643R3 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
LPCAT4Q643R3 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LPCAT4Q643R3 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LPCAT4Q643R3 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.12■□□□□ 0.01
LPCAT4Q643R3 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LPCAT4Q643R3 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
LPCAT4Q643R3 INTS4P1-203ENST00000641008 3683 ntBASIC15.12■□□□□ 0.01
LPCAT4Q643R3 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LPCAT4Q643R3 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LPCAT4Q643R3 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.12■□□□□ 0.01
LPCAT4Q643R3 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
LPCAT4Q643R3 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
LPCAT4Q643R3 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.12■□□□□ 0.01
LPCAT4Q643R3 SIGLEC16-201ENST00000599858 1437 ntBASIC15.12■□□□□ 0.01
LPCAT4Q643R3 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.12■□□□□ 0.01
LPCAT4Q643R3 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.12■□□□□ 0.01
LPCAT4Q643R3 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LPCAT4Q643R3 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LPCAT4Q643R3 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LPCAT4Q643R3 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LPCAT4Q643R3 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
LPCAT4Q643R3 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.12■□□□□ 0.01
LPCAT4Q643R3 SPDYE13P-201ENST00000445314 798 ntBASIC15.12■□□□□ 0.01
LPCAT4Q643R3 PAWRP1-201ENST00000451083 565 ntBASIC15.12■□□□□ 0.01
LPCAT4Q643R3 LY6E-213ENST00000522528 606 ntTSL 3 BASIC15.12■□□□□ 0.01
LPCAT4Q643R3 AC090616.6-201ENST00000582640 721 ntBASIC15.12■□□□□ 0.01
LPCAT4Q643R3 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.12■□□□□ 0.01
LPCAT4Q643R3 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.12■□□□□ 0.01
LPCAT4Q643R3 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.12■□□□□ 0.01
LPCAT4Q643R3 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.12■□□□□ 0.01
LPCAT4Q643R3 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LPCAT4Q643R3 OR2I1P-209ENST00000641730 5365 ntBASIC15.12■□□□□ 0.01
LPCAT4Q643R3 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LPCAT4Q643R3 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.12■□□□□ 0.01
LPCAT4Q643R3 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LPCAT4Q643R3 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LPCAT4Q643R3 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.12■□□□□ 0.01
LPCAT4Q643R3 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC15.12■□□□□ 0.01
LPCAT4Q643R3 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LPCAT4Q643R3 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LPCAT4Q643R3 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LPCAT4Q643R3 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LPCAT4Q643R3 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LPCAT4Q643R3 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LPCAT4Q643R3 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LPCAT4Q643R3 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
LPCAT4Q643R3 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LPCAT4Q643R3 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
LPCAT4Q643R3 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LPCAT4Q643R3 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.11■□□□□ 0.01
LPCAT4Q643R3 AC023024.2-201ENST00000623561 1993 ntBASIC15.11■□□□□ 0.01
LPCAT4Q643R3 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.11■□□□□ 0.01
LPCAT4Q643R3 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LPCAT4Q643R3 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LPCAT4Q643R3 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.11■□□□□ 0.01
LPCAT4Q643R3 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
LPCAT4Q643R3 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LPCAT4Q643R3 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LPCAT4Q643R3 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
LPCAT4Q643R3 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LPCAT4Q643R3 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LPCAT4Q643R3 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.11■□□□□ 0.01
LPCAT4Q643R3 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
LPCAT4Q643R3 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
LPCAT4Q643R3 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
LPCAT4Q643R3 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.11■□□□□ 0.01
LPCAT4Q643R3 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
LPCAT4Q643R3 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC15.11■□□□□ 0.01
LPCAT4Q643R3 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.11■□□□□ 0.01
LPCAT4Q643R3 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms