Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
RFX4Q33E94 RPS2P1-201ENST00000434010 821 ntBASIC14.94□□□□□ -0.02
RFX4Q33E94 DUSP5P1-201ENST00000441325 1139 ntBASIC14.94□□□□□ -0.02
RFX4Q33E94 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC14.94□□□□□ -0.02
RFX4Q33E94 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.94□□□□□ -0.02
RFX4Q33E94 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RFX4Q33E94 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.94□□□□□ -0.02
RFX4Q33E94 OR7E14P-202ENST00000530490 1290 ntBASIC14.94□□□□□ -0.02
RFX4Q33E94 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.94□□□□□ -0.02
RFX4Q33E94 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.94□□□□□ -0.02
RFX4Q33E94 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
RFX4Q33E94 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFX4Q33E94 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.94□□□□□ -0.02
RFX4Q33E94 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFX4Q33E94 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
RFX4Q33E94 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.94□□□□□ -0.02
RFX4Q33E94 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
RFX4Q33E94 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RFX4Q33E94 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFX4Q33E94 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
RFX4Q33E94 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RFX4Q33E94 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFX4Q33E94 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
RFX4Q33E94 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
RFX4Q33E94 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFX4Q33E94 MROH4P-201ENST00000431302 1578 ntBASIC14.94□□□□□ -0.02
RFX4Q33E94 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.94□□□□□ -0.02
RFX4Q33E94 AL390755.1-201ENST00000623716 2027 ntBASIC14.93□□□□□ -0.02
RFX4Q33E94 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.93□□□□□ -0.02
RFX4Q33E94 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.93□□□□□ -0.02
RFX4Q33E94 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFX4Q33E94 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.93□□□□□ -0.02
RFX4Q33E94 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFX4Q33E94 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
RFX4Q33E94 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.93□□□□□ -0.02
RFX4Q33E94 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.93□□□□□ -0.02
RFX4Q33E94 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFX4Q33E94 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
RFX4Q33E94 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFX4Q33E94 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFX4Q33E94 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RFX4Q33E94 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFX4Q33E94 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.93□□□□□ -0.02
RFX4Q33E94 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
RFX4Q33E94 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
RFX4Q33E94 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFX4Q33E94 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFX4Q33E94 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.93□□□□□ -0.02
RFX4Q33E94 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFX4Q33E94 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
RFX4Q33E94 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RFX4Q33E94 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RFX4Q33E94 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC14.93□□□□□ -0.02
RFX4Q33E94 IGHV3-65-201ENST00000523210 341 ntBASIC14.93□□□□□ -0.02
RFX4Q33E94 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RFX4Q33E94 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.93□□□□□ -0.02
RFX4Q33E94 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.93□□□□□ -0.02
RFX4Q33E94 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC14.93□□□□□ -0.02
RFX4Q33E94 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RFX4Q33E94 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RFX4Q33E94 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
RFX4Q33E94 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFX4Q33E94 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFX4Q33E94 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFX4Q33E94 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFX4Q33E94 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFX4Q33E94 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFX4Q33E94 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
RFX4Q33E94 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.93□□□□□ -0.02
RFX4Q33E94 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFX4Q33E94 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFX4Q33E94 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFX4Q33E94 AC112693.3-201ENST00000624819 1983 ntBASIC14.93□□□□□ -0.02
RFX4Q33E94 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFX4Q33E94 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
RFX4Q33E94 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RFX4Q33E94 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.92□□□□□ -0.02
RFX4Q33E94 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.92□□□□□ -0.02
RFX4Q33E94 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.92□□□□□ -0.02
RFX4Q33E94 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
RFX4Q33E94 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RFX4Q33E94 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.92□□□□□ -0.02
RFX4Q33E94 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
RFX4Q33E94 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFX4Q33E94 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFX4Q33E94 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFX4Q33E94 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RFX4Q33E94 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFX4Q33E94 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
RFX4Q33E94 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.92□□□□□ -0.02
RFX4Q33E94 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.92□□□□□ -0.02
RFX4Q33E94 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RFX4Q33E94 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.92□□□□□ -0.02
RFX4Q33E94 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RFX4Q33E94 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.92□□□□□ -0.02
RFX4Q33E94 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC14.92□□□□□ -0.02
RFX4Q33E94 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.92□□□□□ -0.02
RFX4Q33E94 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFX4Q33E94 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.92□□□□□ -0.02
RFX4Q33E94 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms