Protein–RNA interactions for Protein: Q08E93

FAM27E3, Protein FAM27E3, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM27E3Q08E93 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
FAM27E3Q08E93 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
FAM27E3Q08E93 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
FAM27E3Q08E93 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
FAM27E3Q08E93 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
FAM27E3Q08E93 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.87□□□□□ -0.19
FAM27E3Q08E93 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.87□□□□□ -0.19
FAM27E3Q08E93 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
FAM27E3Q08E93 TMEM14DP-201ENST00000422205 345 ntBASIC13.87□□□□□ -0.19
FAM27E3Q08E93 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.87□□□□□ -0.19
FAM27E3Q08E93 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.87□□□□□ -0.19
FAM27E3Q08E93 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.87□□□□□ -0.19
FAM27E3Q08E93 AC007389.4-201ENST00000454674 793 ntBASIC13.87□□□□□ -0.19
FAM27E3Q08E93 ACA64.2-201ENST00000459014 129 ntBASIC13.87□□□□□ -0.19
FAM27E3Q08E93 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
FAM27E3Q08E93 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.87□□□□□ -0.19
FAM27E3Q08E93 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
FAM27E3Q08E93 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.87□□□□□ -0.19
FAM27E3Q08E93 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.87□□□□□ -0.19
FAM27E3Q08E93 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
FAM27E3Q08E93 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.87□□□□□ -0.19
FAM27E3Q08E93 RAB43P1-201ENST00000561790 589 ntBASIC13.87□□□□□ -0.19
FAM27E3Q08E93 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.87□□□□□ -0.19
FAM27E3Q08E93 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
FAM27E3Q08E93 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
FAM27E3Q08E93 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.87□□□□□ -0.19
FAM27E3Q08E93 MIR6752-201ENST00000618442 71 ntBASIC13.87□□□□□ -0.19
FAM27E3Q08E93 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
FAM27E3Q08E93 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
FAM27E3Q08E93 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.87□□□□□ -0.19
FAM27E3Q08E93 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
FAM27E3Q08E93 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
FAM27E3Q08E93 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
FAM27E3Q08E93 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
FAM27E3Q08E93 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.87□□□□□ -0.19
FAM27E3Q08E93 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC13.87□□□□□ -0.19
FAM27E3Q08E93 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
FAM27E3Q08E93 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
FAM27E3Q08E93 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
FAM27E3Q08E93 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.87□□□□□ -0.19
FAM27E3Q08E93 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
FAM27E3Q08E93 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
FAM27E3Q08E93 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
FAM27E3Q08E93 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
FAM27E3Q08E93 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
FAM27E3Q08E93 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
FAM27E3Q08E93 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC13.86□□□□□ -0.19
FAM27E3Q08E93 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
FAM27E3Q08E93 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC13.86□□□□□ -0.19
FAM27E3Q08E93 AC018892.3-201ENST00000623986 2499 ntBASIC13.86□□□□□ -0.19
FAM27E3Q08E93 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.86□□□□□ -0.19
FAM27E3Q08E93 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
FAM27E3Q08E93 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
FAM27E3Q08E93 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.86□□□□□ -0.19
FAM27E3Q08E93 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
FAM27E3Q08E93 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
FAM27E3Q08E93 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
FAM27E3Q08E93 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.86□□□□□ -0.19
FAM27E3Q08E93 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
FAM27E3Q08E93 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
FAM27E3Q08E93 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
FAM27E3Q08E93 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
FAM27E3Q08E93 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
FAM27E3Q08E93 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
FAM27E3Q08E93 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
FAM27E3Q08E93 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
FAM27E3Q08E93 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC13.86□□□□□ -0.19
FAM27E3Q08E93 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.86□□□□□ -0.19
FAM27E3Q08E93 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
FAM27E3Q08E93 AC079776.1-201ENST00000401540 1152 ntBASIC13.86□□□□□ -0.19
FAM27E3Q08E93 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.86□□□□□ -0.19
FAM27E3Q08E93 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
FAM27E3Q08E93 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.86□□□□□ -0.19
FAM27E3Q08E93 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
FAM27E3Q08E93 AC106886.1-201ENST00000568660 600 ntBASIC13.86□□□□□ -0.19
FAM27E3Q08E93 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
FAM27E3Q08E93 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.86□□□□□ -0.19
FAM27E3Q08E93 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
FAM27E3Q08E93 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC13.86□□□□□ -0.19
FAM27E3Q08E93 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
FAM27E3Q08E93 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
FAM27E3Q08E93 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
FAM27E3Q08E93 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.86□□□□□ -0.19
FAM27E3Q08E93 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
FAM27E3Q08E93 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
FAM27E3Q08E93 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
FAM27E3Q08E93 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
FAM27E3Q08E93 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
FAM27E3Q08E93 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
FAM27E3Q08E93 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
FAM27E3Q08E93 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC13.85□□□□□ -0.19
FAM27E3Q08E93 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.85□□□□□ -0.19
FAM27E3Q08E93 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
FAM27E3Q08E93 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
FAM27E3Q08E93 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC13.85□□□□□ -0.19
FAM27E3Q08E93 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.85□□□□□ -0.19
FAM27E3Q08E93 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.85□□□□□ -0.19
FAM27E3Q08E93 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
FAM27E3Q08E93 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
FAM27E3Q08E93 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms