Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC18.62■□□□□ 0.57
GABPAQ06546 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GABPAQ06546 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.62■□□□□ 0.57
GABPAQ06546 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GABPAQ06546 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GABPAQ06546 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
GABPAQ06546 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GABPAQ06546 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GABPAQ06546 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.62■□□□□ 0.57
GABPAQ06546 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GABPAQ06546 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
GABPAQ06546 RAC2-202ENST00000401529 569 ntTSL 4 BASIC18.62■□□□□ 0.57
GABPAQ06546 AC112492.5-201ENST00000421897 457 ntBASIC18.62■□□□□ 0.57
GABPAQ06546 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC18.62■□□□□ 0.57
GABPAQ06546 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC18.62■□□□□ 0.57
GABPAQ06546 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GABPAQ06546 AC007389.4-201ENST00000454674 793 ntBASIC18.62■□□□□ 0.57
GABPAQ06546 GPR53P-205ENST00000457298 1084 ntBASIC18.62■□□□□ 0.57
GABPAQ06546 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC18.62■□□□□ 0.57
GABPAQ06546 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC18.62■□□□□ 0.57
GABPAQ06546 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC18.62■□□□□ 0.57
GABPAQ06546 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
GABPAQ06546 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
GABPAQ06546 HNRNPA1P48-201ENST00000562726 1377 ntBASIC18.62■□□□□ 0.57
GABPAQ06546 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
GABPAQ06546 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GABPAQ06546 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GABPAQ06546 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
GABPAQ06546 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
GABPAQ06546 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC18.62■□□□□ 0.57
GABPAQ06546 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
GABPAQ06546 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GABPAQ06546 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GABPAQ06546 AC124067.4-201ENST00000519691 2379 ntBASIC18.62■□□□□ 0.57
GABPAQ06546 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC18.62■□□□□ 0.57
GABPAQ06546 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GABPAQ06546 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GABPAQ06546 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
GABPAQ06546 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC18.62■□□□□ 0.57
GABPAQ06546 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GABPAQ06546 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GABPAQ06546 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GABPAQ06546 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
GABPAQ06546 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GABPAQ06546 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
GABPAQ06546 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC18.61■□□□□ 0.57
GABPAQ06546 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
GABPAQ06546 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
GABPAQ06546 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GABPAQ06546 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GABPAQ06546 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC18.61■□□□□ 0.57
GABPAQ06546 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GABPAQ06546 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
GABPAQ06546 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC18.61■□□□□ 0.57
GABPAQ06546 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GABPAQ06546 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GABPAQ06546 ACA64.2-201ENST00000459014 129 ntBASIC18.61■□□□□ 0.57
GABPAQ06546 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.61■□□□□ 0.57
GABPAQ06546 AL359711.2-201ENST00000563105 872 ntBASIC18.61■□□□□ 0.57
GABPAQ06546 AC124283.3-201ENST00000570869 594 ntBASIC18.61■□□□□ 0.57
GABPAQ06546 AC008735.3-201ENST00000596646 500 ntBASIC18.61■□□□□ 0.57
GABPAQ06546 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC18.61■□□□□ 0.57
GABPAQ06546 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GABPAQ06546 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GABPAQ06546 FLII-221ENST00000578558 2377 ntTSL 5 BASIC18.61■□□□□ 0.57
GABPAQ06546 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GABPAQ06546 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
GABPAQ06546 FRMD6-AS1-201ENST00000617151 2229 ntBASIC18.61■□□□□ 0.57
GABPAQ06546 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
GABPAQ06546 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.61■□□□□ 0.57
GABPAQ06546 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.6■□□□□ 0.57
GABPAQ06546 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GABPAQ06546 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GABPAQ06546 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.6■□□□□ 0.57
GABPAQ06546 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GABPAQ06546 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC18.6■□□□□ 0.57
GABPAQ06546 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC18.6■□□□□ 0.57
GABPAQ06546 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GABPAQ06546 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GABPAQ06546 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GABPAQ06546 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GABPAQ06546 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GABPAQ06546 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC18.6■□□□□ 0.57
GABPAQ06546 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC18.6■□□□□ 0.57
GABPAQ06546 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
GABPAQ06546 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GABPAQ06546 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GABPAQ06546 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
GABPAQ06546 ATP5G2P4-201ENST00000442175 420 ntBASIC18.6■□□□□ 0.57
GABPAQ06546 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC18.6■□□□□ 0.57
GABPAQ06546 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC18.6■□□□□ 0.57
GABPAQ06546 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC18.6■□□□□ 0.57
GABPAQ06546 KRT17P8-201ENST00000540749 863 ntBASIC18.6■□□□□ 0.57
GABPAQ06546 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC18.6■□□□□ 0.57
GABPAQ06546 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC18.6■□□□□ 0.57
GABPAQ06546 AL359881.2-201ENST00000602973 570 ntBASIC18.6■□□□□ 0.57
GABPAQ06546 AL008721.1-201ENST00000609964 604 ntBASIC18.6■□□□□ 0.57
GABPAQ06546 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
GABPAQ06546 ABBA01031660.1-201ENST00000635219 756 ntBASIC18.6■□□□□ 0.57
GABPAQ06546 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms