Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCNA1P78396 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC18.05■□□□□ 0.48
CCNA1P78396 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC18.05■□□□□ 0.48
CCNA1P78396 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCNA1P78396 DERL2-202ENST00000570848 657 ntTSL 5 BASIC18.05■□□□□ 0.48
CCNA1P78396 AC093813.1-201ENST00000605066 256 ntBASIC18.05■□□□□ 0.48
CCNA1P78396 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCNA1P78396 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCNA1P78396 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.05■□□□□ 0.48
CCNA1P78396 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CCNA1P78396 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCNA1P78396 CYP2AB1P-202ENST00000454440 1456 ntBASIC18.05■□□□□ 0.48
CCNA1P78396 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCNA1P78396 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CCNA1P78396 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCNA1P78396 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCNA1P78396 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.05■□□□□ 0.48
CCNA1P78396 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCNA1P78396 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CCNA1P78396 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCNA1P78396 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCNA1P78396 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCNA1P78396 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC18.05■□□□□ 0.48
CCNA1P78396 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCNA1P78396 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC18.04■□□□□ 0.48
CCNA1P78396 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCNA1P78396 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC18.04■□□□□ 0.48
CCNA1P78396 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.04■□□□□ 0.48
CCNA1P78396 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CCNA1P78396 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCNA1P78396 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CCNA1P78396 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC18.04■□□□□ 0.48
CCNA1P78396 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCNA1P78396 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCNA1P78396 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCNA1P78396 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCNA1P78396 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCNA1P78396 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CCNA1P78396 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
CCNA1P78396 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCNA1P78396 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCNA1P78396 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCNA1P78396 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CCNA1P78396 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC18.04■□□□□ 0.48
CCNA1P78396 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC18.04■□□□□ 0.48
CCNA1P78396 AC106760.1-201ENST00000508690 800 ntBASIC18.04■□□□□ 0.48
CCNA1P78396 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCNA1P78396 KRT90P-201ENST00000549264 1064 ntBASIC18.04■□□□□ 0.48
CCNA1P78396 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC18.04■□□□□ 0.48
CCNA1P78396 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCNA1P78396 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCNA1P78396 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCNA1P78396 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC18.04■□□□□ 0.48
CCNA1P78396 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC18.04■□□□□ 0.48
CCNA1P78396 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.04■□□□□ 0.48
CCNA1P78396 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCNA1P78396 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCNA1P78396 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCNA1P78396 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCNA1P78396 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCNA1P78396 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.03■□□□□ 0.48
CCNA1P78396 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCNA1P78396 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCNA1P78396 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCNA1P78396 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCNA1P78396 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCNA1P78396 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC18.03■□□□□ 0.48
CCNA1P78396 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCNA1P78396 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCNA1P78396 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCNA1P78396 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.03■□□□□ 0.48
CCNA1P78396 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCNA1P78396 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCNA1P78396 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCNA1P78396 TEX30-203ENST00000376022 828 ntTSL 2 BASIC18.03■□□□□ 0.48
CCNA1P78396 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCNA1P78396 BCYRN1-201ENST00000418539 200 ntBASIC18.03■□□□□ 0.48
CCNA1P78396 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCNA1P78396 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
CCNA1P78396 AC108725.1-201ENST00000495472 409 ntBASIC18.03■□□□□ 0.48
CCNA1P78396 AC022137.2-201ENST00000503482 481 ntBASIC18.03■□□□□ 0.48
CCNA1P78396 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC18.03■□□□□ 0.48
CCNA1P78396 AC026410.3-201ENST00000514280 936 ntBASIC18.03■□□□□ 0.48
CCNA1P78396 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.03■□□□□ 0.48
CCNA1P78396 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
CCNA1P78396 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC18.03■□□□□ 0.48
CCNA1P78396 AC084346.2-201ENST00000607097 949 ntBASIC18.03■□□□□ 0.48
CCNA1P78396 AC244093.1-201ENST00000610837 814 ntBASIC18.03■□□□□ 0.48
CCNA1P78396 LARP4-220ENST00000615080 856 ntTSL 5 BASIC18.03■□□□□ 0.48
CCNA1P78396 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC18.03■□□□□ 0.48
CCNA1P78396 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
CCNA1P78396 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCNA1P78396 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCNA1P78396 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CCNA1P78396 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCNA1P78396 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.03■□□□□ 0.48
CCNA1P78396 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCNA1P78396 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCNA1P78396 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCNA1P78396 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms