Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC18.78■□□□□ 0.6
CNTNAP1P78357 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNTNAP1P78357 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNTNAP1P78357 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNTNAP1P78357 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CNTNAP1P78357 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNTNAP1P78357 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CNTNAP1P78357 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
CNTNAP1P78357 ME2P1-201ENST00000426028 1970 ntBASIC18.78■□□□□ 0.6
CNTNAP1P78357 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNTNAP1P78357 AC006001.1-201ENST00000325130 474 ntBASIC18.78■□□□□ 0.6
CNTNAP1P78357 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CNTNAP1P78357 RN7SL818P-201ENST00000485099 259 ntBASIC18.78■□□□□ 0.6
CNTNAP1P78357 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
CNTNAP1P78357 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC18.78■□□□□ 0.6
CNTNAP1P78357 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC18.78■□□□□ 0.6
CNTNAP1P78357 RN7SL725P-201ENST00000606439 259 ntBASIC18.78■□□□□ 0.6
CNTNAP1P78357 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC18.78■□□□□ 0.6
CNTNAP1P78357 AC018735.1-201ENST00000437208 1502 ntBASIC18.78■□□□□ 0.6
CNTNAP1P78357 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
CNTNAP1P78357 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC18.78■□□□□ 0.6
CNTNAP1P78357 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNTNAP1P78357 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CNTNAP1P78357 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.77■□□□□ 0.6
CNTNAP1P78357 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CNTNAP1P78357 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.77■□□□□ 0.6
CNTNAP1P78357 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CNTNAP1P78357 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CNTNAP1P78357 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC18.77■□□□□ 0.6
CNTNAP1P78357 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.77■□□□□ 0.6
CNTNAP1P78357 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNTNAP1P78357 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC18.77■□□□□ 0.6
CNTNAP1P78357 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.77■□□□□ 0.6
CNTNAP1P78357 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNTNAP1P78357 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC18.77■□□□□ 0.6
CNTNAP1P78357 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CNTNAP1P78357 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNTNAP1P78357 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNTNAP1P78357 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CNTNAP1P78357 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC18.77■□□□□ 0.6
CNTNAP1P78357 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CNTNAP1P78357 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNTNAP1P78357 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CNTNAP1P78357 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC18.77■□□□□ 0.6
CNTNAP1P78357 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CNTNAP1P78357 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC18.77■□□□□ 0.6
CNTNAP1P78357 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC18.77■□□□□ 0.6
CNTNAP1P78357 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC18.77■□□□□ 0.6
CNTNAP1P78357 IQSEC3P1-201ENST00000538799 536 ntBASIC18.77■□□□□ 0.6
CNTNAP1P78357 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC18.77■□□□□ 0.6
CNTNAP1P78357 RN7SL555P-201ENST00000584742 339 ntBASIC18.77■□□□□ 0.6
CNTNAP1P78357 AC000095.1-201ENST00000603208 874 ntBASIC18.77■□□□□ 0.6
CNTNAP1P78357 AL450472.2-201ENST00000603663 1156 ntBASIC18.77■□□□□ 0.6
CNTNAP1P78357 AL451050.2-201ENST00000606967 682 ntBASIC18.77■□□□□ 0.6
CNTNAP1P78357 AP001505.2-201ENST00000616815 443 ntBASIC18.77■□□□□ 0.6
CNTNAP1P78357 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC18.77■□□□□ 0.6
CNTNAP1P78357 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC18.77■□□□□ 0.6
CNTNAP1P78357 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC18.77■□□□□ 0.59
CNTNAP1P78357 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC18.77■□□□□ 0.59
CNTNAP1P78357 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CNTNAP1P78357 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CNTNAP1P78357 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
CNTNAP1P78357 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
CNTNAP1P78357 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC18.77■□□□□ 0.59
CNTNAP1P78357 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC18.77■□□□□ 0.59
CNTNAP1P78357 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CNTNAP1P78357 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CNTNAP1P78357 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC18.77■□□□□ 0.59
CNTNAP1P78357 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.77■□□□□ 0.59
CNTNAP1P78357 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNTNAP1P78357 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CNTNAP1P78357 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNTNAP1P78357 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CNTNAP1P78357 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.76■□□□□ 0.59
CNTNAP1P78357 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CNTNAP1P78357 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CNTNAP1P78357 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.76■□□□□ 0.59
CNTNAP1P78357 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CNTNAP1P78357 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNTNAP1P78357 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNTNAP1P78357 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNTNAP1P78357 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CNTNAP1P78357 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CNTNAP1P78357 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CNTNAP1P78357 CYP46A4P-201ENST00000414953 267 ntBASIC18.76■□□□□ 0.59
CNTNAP1P78357 AL133466.1-201ENST00000447582 150 ntBASIC18.76■□□□□ 0.59
CNTNAP1P78357 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
CNTNAP1P78357 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC18.76■□□□□ 0.59
CNTNAP1P78357 AL096828.3-201ENST00000615354 462 ntBASIC18.76■□□□□ 0.59
CNTNAP1P78357 AL353726.2-201ENST00000623259 884 ntBASIC18.76■□□□□ 0.59
CNTNAP1P78357 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18.76■□□□□ 0.59
CNTNAP1P78357 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNTNAP1P78357 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
CNTNAP1P78357 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNTNAP1P78357 AC012313.1-201ENST00000593393 3059 ntBASIC18.75■□□□□ 0.59
CNTNAP1P78357 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CNTNAP1P78357 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CNTNAP1P78357 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.75■□□□□ 0.59
CNTNAP1P78357 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNTNAP1P78357 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms