Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 SNORA78-201ENST00000459373 127 ntBASIC13.8□□□□□ -0.2
AP3S2P59780 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC13.8□□□□□ -0.2
AP3S2P59780 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC13.8□□□□□ -0.2
AP3S2P59780 ABR-204ENST00000543210 1049 ntTSL 2 BASIC13.8□□□□□ -0.2
AP3S2P59780 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC13.8□□□□□ -0.2
AP3S2P59780 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC13.8□□□□□ -0.2
AP3S2P59780 ABR-217ENST00000572441 563 ntTSL 4 BASIC13.8□□□□□ -0.2
AP3S2P59780 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC13.8□□□□□ -0.2
AP3S2P59780 REXO1L3P-201ENST00000622202 1288 ntBASIC13.8□□□□□ -0.2
AP3S2P59780 AC073592.4-201ENST00000623827 446 ntBASIC13.8□□□□□ -0.2
AP3S2P59780 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC13.8□□□□□ -0.2
AP3S2P59780 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
AP3S2P59780 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP3S2P59780 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP3S2P59780 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC13.8□□□□□ -0.2
AP3S2P59780 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.8□□□□□ -0.2
AP3S2P59780 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP3S2P59780 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP3S2P59780 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP3S2P59780 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
AP3S2P59780 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.8□□□□□ -0.2
AP3S2P59780 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP3S2P59780 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP3S2P59780 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
AP3S2P59780 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP3S2P59780 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP3S2P59780 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP3S2P59780 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
AP3S2P59780 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
AP3S2P59780 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP3S2P59780 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP3S2P59780 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP3S2P59780 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
AP3S2P59780 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP3S2P59780 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP3S2P59780 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
AP3S2P59780 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP3S2P59780 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP3S2P59780 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.79□□□□□ -0.2
AP3S2P59780 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
AP3S2P59780 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
AP3S2P59780 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP3S2P59780 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP3S2P59780 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP3S2P59780 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC13.79□□□□□ -0.2
AP3S2P59780 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP3S2P59780 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP3S2P59780 SOD2-201ENST00000337404 991 ntTSL 2 BASIC13.79□□□□□ -0.2
AP3S2P59780 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP3S2P59780 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC13.79□□□□□ -0.2
AP3S2P59780 YBX1P2-201ENST00000489612 999 ntBASIC13.79□□□□□ -0.2
AP3S2P59780 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC13.79□□□□□ -0.2
AP3S2P59780 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
AP3S2P59780 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP3S2P59780 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.79□□□□□ -0.2
AP3S2P59780 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP3S2P59780 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.79□□□□□ -0.2
AP3S2P59780 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP3S2P59780 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.79□□□□□ -0.2
AP3S2P59780 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP3S2P59780 NCF1C-201ENST00000438382 1427 ntBASIC13.79□□□□□ -0.2
AP3S2P59780 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.79□□□□□ -0.2
AP3S2P59780 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP3S2P59780 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP3S2P59780 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
AP3S2P59780 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP3S2P59780 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.79□□□□□ -0.2
AP3S2P59780 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC13.79□□□□□ -0.2
AP3S2P59780 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP3S2P59780 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
AP3S2P59780 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP3S2P59780 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
AP3S2P59780 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.78□□□□□ -0.2
AP3S2P59780 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP3S2P59780 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.78□□□□□ -0.2
AP3S2P59780 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.78□□□□□ -0.2
AP3S2P59780 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
AP3S2P59780 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC13.78□□□□□ -0.2
AP3S2P59780 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.78□□□□□ -0.2
AP3S2P59780 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
AP3S2P59780 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP3S2P59780 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP3S2P59780 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP3S2P59780 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP3S2P59780 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP3S2P59780 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
AP3S2P59780 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
AP3S2P59780 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP3S2P59780 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP3S2P59780 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.78□□□□□ -0.2
AP3S2P59780 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP3S2P59780 HCG4-201ENST00000418983 998 ntBASIC13.78□□□□□ -0.2
AP3S2P59780 BX664615.1-201ENST00000443558 458 ntBASIC13.78□□□□□ -0.2
AP3S2P59780 AC245100.5-201ENST00000452108 331 ntBASIC13.78□□□□□ -0.2
AP3S2P59780 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
AP3S2P59780 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
AP3S2P59780 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC13.78□□□□□ -0.2
AP3S2P59780 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC13.78□□□□□ -0.2
AP3S2P59780 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC13.78□□□□□ -0.2
AP3S2P59780 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms