Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.72□□□□□ -0.05
CLDN20P56880 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.72□□□□□ -0.05
CLDN20P56880 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN20P56880 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN20P56880 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN20P56880 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN20P56880 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.72□□□□□ -0.05
CLDN20P56880 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN20P56880 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN20P56880 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.72□□□□□ -0.05
CLDN20P56880 RFPL4AP1-201ENST00000530883 850 ntBASIC14.72□□□□□ -0.05
CLDN20P56880 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.72□□□□□ -0.05
CLDN20P56880 AL512356.2-201ENST00000546955 174 ntBASIC14.72□□□□□ -0.05
CLDN20P56880 RARRES2P9-201ENST00000565168 469 ntBASIC14.72□□□□□ -0.05
CLDN20P56880 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.72□□□□□ -0.05
CLDN20P56880 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.72□□□□□ -0.05
CLDN20P56880 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN20P56880 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.72□□□□□ -0.05
CLDN20P56880 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN20P56880 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN20P56880 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN20P56880 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.72□□□□□ -0.05
CLDN20P56880 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN20P56880 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.72□□□□□ -0.05
CLDN20P56880 AC008677.1-201ENST00000519230 1561 ntBASIC14.72□□□□□ -0.05
CLDN20P56880 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.72□□□□□ -0.05
CLDN20P56880 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN20P56880 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.72□□□□□ -0.05
CLDN20P56880 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.72□□□□□ -0.05
CLDN20P56880 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.72□□□□□ -0.05
CLDN20P56880 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.72□□□□□ -0.05
CLDN20P56880 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN20P56880 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.71□□□□□ -0.05
CLDN20P56880 AL589702.1-201ENST00000641229 1509 ntBASIC14.71□□□□□ -0.05
CLDN20P56880 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN20P56880 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
CLDN20P56880 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.71□□□□□ -0.05
CLDN20P56880 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN20P56880 ME2P1-201ENST00000426028 1970 ntBASIC14.71□□□□□ -0.05
CLDN20P56880 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN20P56880 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN20P56880 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN20P56880 AL603832.2-201ENST00000566195 2125 ntBASIC14.71□□□□□ -0.05
CLDN20P56880 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN20P56880 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN20P56880 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.71□□□□□ -0.05
CLDN20P56880 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
CLDN20P56880 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN20P56880 HLA-H-201ENST00000383620 1096 ntBASIC14.71□□□□□ -0.05
CLDN20P56880 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
CLDN20P56880 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.71□□□□□ -0.05
CLDN20P56880 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.71□□□□□ -0.05
CLDN20P56880 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.71□□□□□ -0.05
CLDN20P56880 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.71□□□□□ -0.05
CLDN20P56880 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.71□□□□□ -0.05
CLDN20P56880 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.71□□□□□ -0.05
CLDN20P56880 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.71□□□□□ -0.05
CLDN20P56880 AC069262.1-201ENST00000539058 672 ntBASIC14.71□□□□□ -0.05
CLDN20P56880 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.71□□□□□ -0.05
CLDN20P56880 MIR6080-201ENST00000617359 66 ntBASIC14.71□□□□□ -0.05
CLDN20P56880 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.71□□□□□ -0.05
CLDN20P56880 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.71□□□□□ -0.05
CLDN20P56880 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.71□□□□□ -0.05
CLDN20P56880 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.71□□□□□ -0.05
CLDN20P56880 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN20P56880 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN20P56880 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN20P56880 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.71□□□□□ -0.05
CLDN20P56880 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.71□□□□□ -0.05
CLDN20P56880 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN20P56880 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN20P56880 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.71□□□□□ -0.05
CLDN20P56880 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
CLDN20P56880 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CLDN20P56880 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
CLDN20P56880 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN20P56880 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.7□□□□□ -0.06
CLDN20P56880 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.7□□□□□ -0.06
CLDN20P56880 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CLDN20P56880 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CLDN20P56880 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN20P56880 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN20P56880 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CLDN20P56880 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.7□□□□□ -0.06
CLDN20P56880 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN20P56880 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
CLDN20P56880 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CLDN20P56880 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN20P56880 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.7□□□□□ -0.06
CLDN20P56880 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.7□□□□□ -0.06
CLDN20P56880 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.7□□□□□ -0.06
CLDN20P56880 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN20P56880 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN20P56880 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN20P56880 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN20P56880 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
CLDN20P56880 FAM220BP-201ENST00000377689 816 ntBASIC14.7□□□□□ -0.06
CLDN20P56880 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.7□□□□□ -0.06
CLDN20P56880 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.7□□□□□ -0.06
CLDN20P56880 RNA5SP410-201ENST00000516285 106 ntBASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms