Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
CLDN12P56749 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN12P56749 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CLDN12P56749 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CLDN12P56749 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN12P56749 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN12P56749 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN12P56749 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN12P56749 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN12P56749 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CLDN12P56749 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.98□□□□□ -0.17
CLDN12P56749 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.98□□□□□ -0.17
CLDN12P56749 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN12P56749 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN12P56749 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC13.98□□□□□ -0.17
CLDN12P56749 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.98□□□□□ -0.17
CLDN12P56749 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.98□□□□□ -0.17
CLDN12P56749 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.97□□□□□ -0.17
CLDN12P56749 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CLDN12P56749 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN12P56749 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.97□□□□□ -0.17
CLDN12P56749 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN12P56749 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN12P56749 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
CLDN12P56749 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN12P56749 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.97□□□□□ -0.17
CLDN12P56749 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CLDN12P56749 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.97□□□□□ -0.17
CLDN12P56749 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.97□□□□□ -0.17
CLDN12P56749 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN12P56749 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN12P56749 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.97□□□□□ -0.17
CLDN12P56749 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN12P56749 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN12P56749 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN12P56749 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN12P56749 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC13.97□□□□□ -0.17
CLDN12P56749 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN12P56749 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC13.97□□□□□ -0.17
CLDN12P56749 COPS8-203ENST00000409334 794 ntTSL 5 BASIC13.97□□□□□ -0.17
CLDN12P56749 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN12P56749 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CLDN12P56749 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CLDN12P56749 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN12P56749 METTL23-204ENST00000586752 904 ntTSL 2 BASIC13.97□□□□□ -0.17
CLDN12P56749 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN12P56749 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC13.97□□□□□ -0.17
CLDN12P56749 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC13.97□□□□□ -0.17
CLDN12P56749 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC13.97□□□□□ -0.17
CLDN12P56749 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN12P56749 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
CLDN12P56749 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN12P56749 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN12P56749 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
CLDN12P56749 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CLDN12P56749 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN12P56749 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CLDN12P56749 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
CLDN12P56749 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN12P56749 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN12P56749 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN12P56749 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN12P56749 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
CLDN12P56749 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN12P56749 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN12P56749 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.97□□□□□ -0.17
CLDN12P56749 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN12P56749 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN12P56749 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN12P56749 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN12P56749 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.97□□□□□ -0.17
CLDN12P56749 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC13.96□□□□□ -0.17
CLDN12P56749 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN12P56749 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
CLDN12P56749 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN12P56749 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN12P56749 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN12P56749 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN12P56749 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN12P56749 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.96□□□□□ -0.17
CLDN12P56749 AC011477.6-201ENST00000604980 1927 ntBASIC13.96□□□□□ -0.17
CLDN12P56749 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN12P56749 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN12P56749 AC097376.2-205ENST00000610159 5334 ntBASIC13.96□□□□□ -0.17
CLDN12P56749 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.96□□□□□ -0.17
CLDN12P56749 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN12P56749 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.96□□□□□ -0.17
CLDN12P56749 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CLDN12P56749 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN12P56749 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN12P56749 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC13.96□□□□□ -0.17
CLDN12P56749 LAGE3P1-201ENST00000425356 484 ntBASIC13.96□□□□□ -0.17
CLDN12P56749 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC13.96□□□□□ -0.17
CLDN12P56749 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC13.96□□□□□ -0.17
CLDN12P56749 AC021087.4-201ENST00000563761 564 ntBASIC13.96□□□□□ -0.17
CLDN12P56749 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
CLDN12P56749 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.96□□□□□ -0.17
CLDN12P56749 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC13.96□□□□□ -0.17
CLDN12P56749 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC13.96□□□□□ -0.17
CLDN12P56749 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms